Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01991 ATGGGTCGTCCACCCAGCAATGGAGGCCCCGCCTTCCGCTTCACTCAGCCAGAGGTTGCAGAAATGGAAACTATTCTTCAAGAACACAACAATGCAATGCCAGCACGTGATGTTCTTGCAGCTCTTGCAGAGAAGTTCAGTGAATCACCAGACCGTAAAGGCAAGATTACAGTGCAGATGAAGCAAGTTTGGAATTGGTTTCAAAATAAGCGGTATGCGATAAGGGCAAAATCAAGTAAGACTCCTGGAAAGTTAAATATCACACCTATGCCTCGAGATGATTCAGTCCCAGTAAGGAATTTGCCTCAAGCAACAGCTGCTCCAATTCCTGCTGCTTCAGTTTCAGTTCCAACAACAGCAAAAGTAACTCCAGAAAATTCAGTTATGGAATTTGAAGCTAAATCTGGAAGGGATGGAGCATGGTACGATGTGGCTAGCTTTCTATCACACAGATATTTGGAGACCAGTGACCCGGAAGTGCTGATACGGTTTGCTGGTTTTGGACCTGAGGAAGATGAGTGGGTTAATGTTCGAAGGAATGTCAGGCCACGCTCGCTGCCATGTGAATCATCAGAATGTGTTGCAGTCCTCCCTGGAGATCTCATACTTTGTTTTCAGGAAGGTAAAGAGCAAGCCCTCTACTTTGATGCCCATGTCCTTGATGCCCAAAGACGGAGGCATGATGTAAGAGGCTGTCGATGTAGATTTTTGGTTCGTTATGATCATGATCAGTCAGAGGAAATCGTGCCACTTAGGAAGGTTTGTCGTAGGCCTGAAACTGATTACAGATTACAGCAACTTCATGCTGTGAATGATGCCGCAGCACCTGTGGATCAGCAAAAGACTGGCATGGATCCATCAAATGTTCATGCTATCAGGGTTACTACTTCTGAAACAATGTCAAAGCAGCAGATTGCAAATATTCATATCACAACATCAATTATGCAAACAAATGCCCCTTTAGCCCCACAAAGTATGAATGTGGATCCAAAGAAAACTGAAACAACAACCACTGATATTCAAGCTGGAAATCCCATCATTACCCCAGGCAGTGCACCATTCACTAATATCATTACTACAAGCAGTGTTCCTGAAGTCCCTACTCAAAACATGACTGAAGGGAAATAA 1128 0.4424 MGRPPSNGGPAFRFTQPEVAEMETILQEHNNAMPARDVLAALAEKFSESPDRKGKITVQMKQVWNWFQNKRYAIRAKSSKTPGKLNITPMPRDDSVPVRNLPQATAAPIPAASVSVPTTAKVTPENSVMEFEAKSGRDGAWYDVASFLSHRYLETSDPEVLIRFAGFGPEEDEWVNVRRNVRPRSLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDAQRRRHDVRGCRCRFLVRYDHDQSEEIVPLRKVCRRPETDYRLQQLHAVNDAAAPVDQQKTGMDPSNVHAIRVTTSETMSKQQIANIHITTSIMQTNAPLAPQSMNVDPKKTETTTTDIQAGNPIITPGSAPFTNIITTSSVPEVPTQNMTEGK* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01991 375 SMART HOX_1 7 81 IPR001356 GO:0003677
Rops3g01991 375 Pfam SAWADEE domain 129 255 IPR032001 GO:0003682
Rops3g01991 375 SUPERFAMILY Homeodomain-like 4 76 IPR009057 -
Rops3g01991 375 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 1 333 IPR039276 -
Rops3g01991 375 Gene3D - 126 187 - -
Rops3g01991 375 ProSiteProfiles 'Homeobox' domain profile. 13 77 IPR001356 GO:0003677
Rops3g01991 375 CDD homeodomain 13 75 IPR001356 GO:0003677
Rops3g01991 375 Gene3D - 188 260 - -
Rops3g01991 375 Gene3D - 10 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01991 Rops-Chr3 35727054 35742863 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g01991 3 35727054 35742863 Rops3g01991 3 35727054 35742863 ECH