Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g01889 ATGGCCACCGTTATCGATCCCCTCTCCGTCGTCCCTCGCCCTTCCGCCGCCTTCTCTTCCGTCTCAGCCCGCCGGAGCTCTGCCAAGTTGCCACTCTACACGGGCCTCAAGCCCAGGCCCAGGCCCATCGCTGCCACTCGTTTATCTGCTTCGCCCGCTTCCAGAATCGTTACTCGCACTGCACGTGTCGTGTGCGAGGCTCAGGATACCGCTGTCGAAGTGGCTCCTATTACTGATGCAAATTGGCAATCACTTGTCCTTGAATCTGAATCTCCCGTTTTGGTTGAATTCTGGGCTCCATGGTGTGGTCCCTGCCGAATGATCCACCCTATGATTGATGAACTGGCAAAGCAATATGCTGGTAAGCTCAAGTGTTACAAACTCAATACTGATGAGAGCCCTTCAACCGCTACTCGGTATGGAATTCGAAGCATCCCAACTGTCATGATCTTCAAGAGTGGTGAGAAGAAAGATACAGTTATTGGTGCTGTGCCCAAGTCAACATTGACCACGAGCATAGAGAAATTCTTATGA 534 0.5206 MATVIDPLSVVPRPSAAFSSVSARRSSAKLPLYTGLKPRPRPIAATRLSASPASRIVTRTARVVCEAQDTAVEVAPITDANWQSLVLESESPVLVEFWAPWCGPCRMIHPMIDELAKQYAGKLKCYKLNTDESPSTATRYGIRSIPTVMIFKSGEKKDTVIGAVPKSTLTTSIEKFL* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g01889 177 Gene3D Glutaredoxin 74 177 - -
Rops3g01889 177 PANTHER GEO12009P1 65 177 - -
Rops3g01889 177 PRINTS Thioredoxin family signature 93 101 - -
Rops3g01889 177 PRINTS Thioredoxin family signature 141 152 - -
Rops3g01889 177 PRINTS Thioredoxin family signature 101 110 - -
Rops3g01889 177 ProSitePatterns Thioredoxin family active site. 94 112 IPR017937 -
Rops3g01889 177 FunFam Thioredoxin 68 177 - -
Rops3g01889 177 CDD TRX_family 80 174 - -
Rops3g01889 177 Pfam Thioredoxin 74 174 IPR013766 -
Rops3g01889 177 ProSiteProfiles Thioredoxin domain profile. 65 177 IPR013766 -
Rops3g01889 177 NCBIfam thioredoxin 78 176 IPR005746 GO:0015035
Rops3g01889 177 SUPERFAMILY Thioredoxin-like 70 177 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g01889 Rops-Chr3 32923159 32925481 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g01889 3 32923159 32925481 Rops3g01889 3 32923159 32925481 ECH