Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00733 ATGGCTAGGAAAGATAGTCTGGATTCATCCGGAGATGGGAGGAAAATTACAATATGCAATGTCTTTAAGGATGCTGGACTTGTTTTCAAATCTGACGACCTTGGTCGTGAAATATTATCAATTGCACTGCCTTCAGCAATGGCTTTGACAGCTGACCCTATTGCTTCACTGGTTGACACTGCATTCATTGGTCAAATAGGTCCAGTGGAGCTTGCTGCTGTAGGAGTGTCTATAGCTCTCTTCAATCAAATATCAAGAATTGCAATATTCCCACTAGTCAGTGTCACTACCTCTTTTGTGGCTGAGGAAGATACCCTTTCCGGAACCGATCCTCAGGTAGATGAGAATGAACGCTTGGAAGCATGTCCAATTATGGATGCTGAAAAAAAAGAGTTCATACCAAATAAAGGTGGAAATGTTCACAAATCAGATCCGGTTGGTGTTAGATTTAATATAAGTAAGGTTAATCATGAGAAAAGGCATATTGCTACTGCTTCATCAGCATTAGTTATCGGTGGCATTATTGGCCTCATCCAAGCAATATTCCTCATATCTGCTGCAAAACCTTTGCTGAACTTCATGGGAGTAACCTCTGATTCTCCTATGCTAAAGCCTGCACTGAACTACCTGGCATTGAGGTCCCTTGGTGCTCCTGCAGTTCTTCTCTCCTTATCAATGCAGGCAGTCTTCCGAGGATTCAAAGATACTAAAACACCTTTATATGCCACTGTGGCAGGAGATGTGACCAACATAGCTCTAGATCCTGTATTCATGTTTGTATTCCGCTTGGGCGTCAATGGTGCAGCCATTGCTCATGTTATATCTCAGTACCTGATTTCTTTTATACTCCTGTGGAGCTTGATGAAAAAAGTTGAACTTATGCCTCCAAGTATCAAGCATCTGCAATTTGATCGGTTTCTTAAAAACGGTTCTCTATTATTAATTAGAGTGATTGCTGTAACATTCTGTGTGACTCTGGCGGCATCATTAGCTGCACGTCAGGGATCAACTTCCATGGCTGCATTTCAAGTCTGCCTGCAGATTTGGTTGGCAATGTCTCTACTTGCTGATGGTCTGGCTATTGCTGGGCAGGCGATTCTTGCTGGTGCATTTGCTAACAAGGACTTTGACAAGGCCAAAGCAACTGCATCCCGAATATTACAGATGGGTTTGGTTCTTGGATTTGCTCTAGCATTCATTCTTGGAACTGGACTTCATTTTGGAGCTAAATTATTTACAAAAGATATAGATGTCCTCCACCTCATTAGTATTGGGATACCGTTCGTAGCAGGCACTCAGCCCATCAACGCTTTGGCATTTGTATTTGATGGTATCAACTTTGGGGCATCTGATTTTGCATATTCAGCCTTTTCTTTGGTTACGGTGGCAATTGTCAGCATCATTAGTCTACTTATTTTATCCTCTGTTGGCAAATTCATAGGAATTTGGATTGCTTTGACCATCTATATGGGCCTTAGAGCATTTGTTGGCTTCTTGAGGATTGGAACGGGTACAGGACCTTGGGAGTTCCTCAGAAGCTGA 1542 0.4235 MARKDSLDSSGDGRKITICNVFKDAGLVFKSDDLGREILSIALPSAMALTADPIASLVDTAFIGQIGPVELAAVGVSIALFNQISRIAIFPLVSVTTSFVAEEDTLSGTDPQVDENERLEACPIMDAEKKEFIPNKGGNVHKSDPVGVRFNISKVNHEKRHIATASSALVIGGIIGLIQAIFLISAAKPLLNFMGVTSDSPMLKPALNYLALRSLGAPAVLLSLSMQAVFRGFKDTKTPLYATVAGDVTNIALDPVFMFVFRLGVNGAAIAHVISQYLISFILLWSLMKKVELMPPSIKHLQFDRFLKNGSLLLIRVIAVTFCVTLAASLAARQGSTSMAAFQVCLQIWLAMSLLADGLAIAGQAILAGAFANKDFDKAKATASRILQMGLVLGFALAFILGTGLHFGAKLFTKDIDVLHLISIGIPFVAGTQPINALAFVFDGINFGASDFAYSAFSLVTVAIVSIISLLILSSVGKFIGIWIALTIYMGLRAFVGFLRIGTGTGPWEFLRS* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00733 513 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 19 513 IPR044644 -
Rops3g00733 513 NCBIfam MATE family efflux transporter 44 483 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Rops3g00733 513 CDD MATE_DinF_like 34 503 IPR044644 -
Rops3g00733 513 Pfam MatE 315 468 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Rops3g00733 513 Pfam MatE 164 256 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00733 Rops-Chr3 8986931 8992039 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00816 7 10869414 10874642 Rops3g00733 3 8986931 8992039 PCT