Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00120 ATGGCGACATTTGTGTTCACCCAATGTTCAATGAGGCTAGGCTCCCTCATGTTACAATTAGGCATAAATTTCGTTTTGTTTATGGCCATGGTGATTGCATGCAATGGTTTACATTACCTACTAAAGCCTTATTCACAGCCTCGCATTGCTTCTGACATAATTGTAGGACTAGTTGTGGGCAATGCACCTTTTTTACGTGACTTATATGATGATTTCAACAAAACCTTTGGATTTATCATTGATTTTGGTATGATGTGTTACATGTTAGCTTTGGGTATAGAAATGGATCCTTGTGTACTCTTCAAAAGACCAAGTAGGGATGCTCAAGTTGCTTATGCAGGGATAGCCACCACCTTCATCCTAGCCTGTTCCATAACCCCAATTCTCCGTTACTTCCCAATCAAACATGAAATAGAATCCACCCTCTCCTTCTCAACTCTGCTCTCAAGCACAGCATCACCTGTCCTCACCCGTCTAATAACTAACCTCAAAATAGGCAAGTCAGATATTGGGAAGGTTGTCATAACAGCAGGGATGTACTCAGATTTCCTGTGCTCTTTGCTTCTTTCAGTTGGCTATCTCTCTATACCATTGGATACATTTTGCGCTGATTCTGAAGAAAAGAACAGTCTTAAGAAGGCCATTACAATGGTCTGTGCGGTTGTTGGGCAGACATTGTTCACAGCCGTTTTTTCACCAATTTTTATGAACTGGGTTAACAATGAAAACCCCGAAGGGAAACCCATGAAAGGCTCACACCTGGTACTGTCAATCGCCTTCATGGTCATGATTTGTGCCTCCTCAACTCTATACGATTATAGTCCAATTCTAAGTGCGTTTTTGACAGGGATATGTTTGCCCCGGGAGGGCAGGGTTTCCAAATGGGTTATCAGCAAAACCAACTACTTGTTGACCACCATCTTCTTTCCCATCTTTTTCTTGTGGATGGGGTATGCAGCTGATTTCAGGAAGTTCAAGCCTGGACAAGGAGAAACATGGGCAAGATTGTTTGTACCCATCGGGATAGTAATAGTAGGTAAAGTTGCTGGAACAGTTGTTTATGGGGCACTGCTTGGCTTTCACTGGCCTGAATCAGTTGCAATTGGATTGCTCCTCACCACCAAGGGCCATTTTCATATCTACATGGCTATCAAAGTGATGGGATGTGGCACCTCTATTTCCTCTAGCATTGCATTGGTAATTGCAATATTTTTCACAGTGGTGCATGCCCCCACAGTTGTGGCACATATAATCAAACGTGCCAGGAAAAGGGCACCTACTCATCGCATGGCCCTCCAATTGCTTGCTCCATCAAGTGAGCTAAGGCTACTCCTGTGCCTTCATGGTCCTGAGAACGTTCCTGCTTCCATCAACTTCATGGAGATCACAAGAGGGACAGCAAATCCTGGTATTCTAGTATATGTCGCTGAAATGATTGAACTAACTGATCAATTAGCAGCTACAATAGAGAGGGGTGAAGGACTAGATACAACAACCGTGAAAGACAACGGGGTCATGGAGATGAGAGACCAAATAACCAGCTCGTTTCAAGCCTATGTCGATGATGATGGTGATGGTATCACACTCGAAAGAACATTGGCAGTATCAACAATCCATAACATGGCACAGGACATCTGCTCTTTGACAGACAATTTGATGATTGCCCTCATTATTCTACCATTCCACAGGAGCCAGCGTCAGGATGCAAAATTGGATGGTGGCAATCAAGGGTTCAGATATGTGAACCGAAAGTTATTGAGGAGTGCTCCTTGTTCCGTGGGGATTCTAGTGAACAGAGGCTTAGGGTCCATTGAAAAGATATCAAGATCTCAGGTATCACTCAATGTGGCAACAGTATTCATTGGTGGAAAAGATGATAGAGAAGCACTTGCCTACACCGGTCGTGTAGCACAGCATCCGGGAGTAAAACTCACAGTTATAAGATTACTGGTAGATACAAGTGCAGAATCCTCAAGAATGGCAGCTTACAGGGTGAGCCTTCCAGAGCAGGAGGAGGAGATGAGACTGGATGATGAATGCTTTGCACGGTTCTATGAGAAGCATATGACTGGAGGACGCATTTCCTATATGGAGAAGCATCTTGCTAATGCAGCTGAGACCTTCGCTACTCTCAGATCATTTGAAGGACAATACTCACTGGTCATTGTAGGAAGAGAAGGTGGAGTGAACTCTATATTGACAAAGGGGATGAATGACTGGCAACAGTGCCCAGAACTGGGACCAATAGGGGATGTTCTTTCGGGACAAGACTTCTCAAAGACGGTCTCTGTGTTGATAATCCAACAACACAGACTTAAAGGAGAACTAGATGGGCTTGATGAGGACTTCTCCATCATGTAG 2361 0.4405 MATFVFTQCSMRLGSLMLQLGINFVLFMAMVIACNGLHYLLKPYSQPRIASDIIVGLVVGNAPFLRDLYDDFNKTFGFIIDFGMMCYMLALGIEMDPCVLFKRPSRDAQVAYAGIATTFILACSITPILRYFPIKHEIESTLSFSTLLSSTASPVLTRLITNLKIGKSDIGKVVITAGMYSDFLCSLLLSVGYLSIPLDTFCADSEEKNSLKKAITMVCAVVGQTLFTAVFSPIFMNWVNNENPEGKPMKGSHLVLSIAFMVMICASSTLYDYSPILSAFLTGICLPREGRVSKWVISKTNYLLTTIFFPIFFLWMGYAADFRKFKPGQGETWARLFVPIGIVIVGKVAGTVVYGALLGFHWPESVAIGLLLTTKGHFHIYMAIKVMGCGTSISSSIALVIAIFFTVVHAPTVVAHIIKRARKRAPTHRMALQLLAPSSELRLLLCLHGPENVPASINFMEITRGTANPGILVYVAEMIELTDQLAATIERGEGLDTTTVKDNGVMEMRDQITSSFQAYVDDDGDGITLERTLAVSTIHNMAQDICSLTDNLMIALIILPFHRSQRQDAKLDGGNQGFRYVNRKLLRSAPCSVGILVNRGLGSIEKISRSQVSLNVATVFIGGKDDREALAYTGRVAQHPGVKLTVIRLLVDTSAESSRMAAYRVSLPEQEEEMRLDDECFARFYEKHMTGGRISYMEKHLANAAETFATLRSFEGQYSLVIVGREGGVNSILTKGMNDWQQCPELGPIGDVLSGQDFSKTVSVLIIQQHRLKGELDGLDEDFSIM* 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00120 786 Gene3D - 23 427 IPR038770 -
Rops3g00120 786 FunFam Cation/H(+) antiporter 28 21 427 - -
Rops3g00120 786 PANTHER CATION/H + ANTIPORTER 28 771 - -
Rops3g00120 786 Pfam Sodium/hydrogen exchanger family 29 417 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00120 Rops-Chr3 1681687 1685286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00120 21 786 Antiporter Super Family AT3G52080 50.064 0.0 790
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00120 K26731 - gmx:100815945 1184.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00120 3 1681687 1685286 Rops3g00120 3 1681687 1685286 ECH