Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03881 ATGTACGAAACTAGGGACCCTGCAATTAGGCTCTTCGGCCAGAAGATTCCCCTTCCCGGCGATGCTGACCTTCCTGCCAGCAGTGTCTCTGATTCTCCGCTGGCCATCTATGTTGCCAAGGAAGAAGACAGAGATGGTGGGGATGGAACAGGACAAGAGTCACACCAAAGAGATGAGGATCCAGGAGCTGAAAATGTTGCGGAGAAAAAGCAAGAAGCTGACCCTCCTCCAAATGCAGAAGGGACTAAAAATTCAGGCCCGTCCCCTGAAGCTATAGTGAACCCAAAAACACCTTCAATAGAAGAAGAATCCGCAAAATCAAAAAGTGACAAGTCAGAGAAGGAACAAAGCGATGCAGGCAATTCATCACAAGAGAAAACCCTGAAGAAGCCAGATAAACTGCTACCATGTCCACGCTGCAATAGCATGGACACTAAATTCTGTTACTACAACAACTACAACATCAACCAGCCACGTTATTTCTGCAAAGCATGCCAGAGATATTGGACTGCAGGTGGCACCATGAGGAATGTACCTGTTGGGGCAGGAAGAAGGAAGAACAAGAACTCTACCTCACATTATCGACACATCAGTATCTCTGAGGCTCTTCAAGCAGCTAATGGAACTCATCTTCCCACCTTGAAAAGCAATGGTAGAGTCCTCAGCTTTGGATTAGATGCACCTATTTGTGATTCTATGGCATCTGTCCTAAATCTTGGTGAGAAAAAGGTTCTTAATGGCACAACAAACGGGTTTCATGGCTTTGAGGATCAAAGATTTCCCATTAAAAGTGGGGAAAATGGTGATGACTGCTCAAGTACAACTTCCATTACAGTTTCAAGTTCCATGGGAGAAAGTAACAAAAATAACTTACAACAACCAATGATTCAAAATAATGGTTTCCTTCCTCAACTTCCATGCATACCTAGTGTTCCTTGGCCTTATACATGGAACTCTCCAGTTCCTTCACCTGCTTTGTGTCCTTCAGGATTTCCCATGCCATTCTATCCTGCTGCCTTTTGGAATTGCAGCGTGCCAGGGAATTGGAACGTTCCATGGTTTCCCTCACATTCCTCAGCTCCAAACTCAAATCCAAAGTCTCCAAGCTCAGGTCCAAATTCTCAAACTTTGGGGAAGCACTCTAGGGATGGTGACATGATCAAACAGGACTCTTTGCAAAATGAAGAACCATCAAGGCAAAGAAACGGGTGTGTTTTGGTTCCCAAAACGTTAAGAATTGATGACCCAAGTGAAGCTGCAAAGAGTTCTATATGGGCAACTCTAGGAATTAAGAATGAGTCAGTGAGTGGCGGAGGCATGTTTAAGGCCTTCCAATCAACAAAGGATGAAAAGAATCATGTAGAAACCTCTCCAGTGTTGCTGGCTAACCCTGCAGCTTTGTCTAGATCCCTTAATTTCCATGAGAACTCCTGA 1434 0.4456 MYETRDPAIRLFGQKIPLPGDADLPASSVSDSPLAIYVAKEEDRDGGDGTGQESHQRDEDPGAENVAEKKQEADPPPNAEGTKNSGPSPEAIVNPKTPSIEEESAKSKSDKSEKEQSDAGNSSQEKTLKKPDKLLPCPRCNSMDTKFCYYNNYNINQPRYFCKACQRYWTAGGTMRNVPVGAGRRKNKNSTSHYRHISISEALQAANGTHLPTLKSNGRVLSFGLDAPICDSMASVLNLGEKKVLNGTTNGFHGFEDQRFPIKSGENGDDCSSTTSITVSSSMGESNKNNLQQPMIQNNGFLPQLPCIPSVPWPYTWNSPVPSPALCPSGFPMPFYPAAFWNCSVPGNWNVPWFPSHSSAPNSNPKSPSSGPNSQTLGKHSRDGDMIKQDSLQNEEPSRQRNGCVLVPKTLRIDDPSEAAKSSIWATLGIKNESVSGGGMFKAFQSTKDEKNHVETSPVLLANPAALSRSLNFHENS* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03881 477 MobiDBLite consensus disorder prediction 101 133 - -
Rops2g03881 477 MobiDBLite consensus disorder prediction 267 290 - -
Rops2g03881 477 ProSiteProfiles Zinc finger Dof-type profile. 135 189 IPR003851 GO:0003677|GO:0006355
Rops2g03881 477 Pfam Dof domain, zinc finger 133 189 IPR003851 GO:0003677|GO:0006355
Rops2g03881 477 MobiDBLite consensus disorder prediction 263 290 - -
Rops2g03881 477 MobiDBLite consensus disorder prediction 37 76 - -
Rops2g03881 477 MobiDBLite consensus disorder prediction 357 384 - -
Rops2g03881 477 ProSitePatterns Zinc finger Dof-type signature. 137 173 IPR003851 GO:0003677|GO:0006355
Rops2g03881 477 PANTHER CYCLIC DOF FACTOR 2 5 477 IPR045174 GO:0003700|GO:0006355
Rops2g03881 477 MobiDBLite consensus disorder prediction 15 135 - -
Rops2g03881 477 MobiDBLite consensus disorder prediction 357 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03881 Rops-Chr2 71182844 71186438 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03881 1 475 C2C2-Dof Transcription Factor Family AT3G47500 49.592 9.17e-131 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Rops2g03881 zf-Dof 2.3e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03881 - - gmx:778113 698.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03881 2 71182844 71186438 Rops2g03881 2 71182844 71186438 ECH
Rops1g01099 1 25727039 25730594 Rops2g03881 2 71182844 71186438 ECH