Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03458 ATGATGCAAGAACTGTTGGGTGGTGCTAGCCTCATAGCAGGAGAAAGAAAATCCTCCATTAATGGTGTAGGAGTTCTACTACCATCTACACCATCTCCTTCTTCTCTCCCTTCTTCTTCTTCTACTACCACATCTACCACCACCACCACCAACAACAACAACATCACTACCTCAGCTACCTCATCAAATTCAGAAAACCAAAACCTGAGGTGCCCAAGATGTGATTCATCAAACACAAAGTTCTGTTACTACAACAATTACAACCTCACTCAGCCTCGTCACTTTTGCAAGACATGTCGCCGGTACTGGACCAAAGGAGGTGCTCTGAGGAATGTTCCCATCGGAGGTGGCTGCCGGAAAAACAAGAACATCGGCGGCGTGTCGAACTCGGTGGCTAAAACAACCTCAACTAAGATGAAAACGGTTGCATCAGAGCTTGGAATAAGGTCCTCTCTTGGTCATGGGTTCGAAGTCGAACATGATCTTCAACCAAGCCAAATCCTTTGGGGTTCACCCCAAAATACTCATCTTTTATCTTTGCTGAGAGCTAGCCAGAACCAGAACCCTAACCCTAGTCCCATGTCTATTACAATGAAGGAAGAAGGGAACTTAATGGGGGGGTCCCAGTCCCACATGGTGACTGAACCTTTGGTTTCAAATGGGCTTCTGAATCATCGAAGTTATGATGGTGTTGGGCCTGTTCCTTCACTTGGTTTATGTGGCTCGTTTTGGAGAAACAATAATCAAGATCAACCTCAACAACAAAATGGAGGCTTTGTACTTGGGGAACATCAAAACAGTGGAATTCAAGAACTTTACCAAAAGCTCAGGTCATCATCATCTAATTATTGCAATGACAACTCACCAGTGTTTCTGGGTAACAATATGGCTTCTAATAATTCCTCTTCTATATCCAACATTTTGGGGCCAAATTCAGCTGAATTGGGGTACTGGAATAATCCAACACTTTCCTGGTCTGATCTTCCAACCACCAATGGTGCATATCCGTAA 1011 0.4421 MMQELLGGASLIAGERKSSINGVGVLLPSTPSPSSLPSSSSTTTSTTTTTNNNNITTSATSSNSENQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKNIGGVSNSVAKTTSTKMKTVASELGIRSSLGHGFEVEHDLQPSQILWGSPQNTHLLSLLRASQNQNPNPSPMSITMKEEGNLMGGSQSHMVTEPLVSNGLLNHRSYDGVGPVPSLGLCGSFWRNNNQDQPQQQNGGFVLGEHQNSGIQELYQKLRSSSSNYCNDNSPVFLGNNMASNNSSSISNILGPNSAELGYWNNPTLSWSDLPTTNGAYP* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03458 336 MobiDBLite consensus disorder prediction 23 70 - -
Rops2g03458 336 ProSiteProfiles Zinc finger Dof-type profile. 69 123 IPR003851 GO:0003677|GO:0006355
Rops2g03458 336 ProSitePatterns Zinc finger Dof-type signature. 71 107 IPR003851 GO:0003677|GO:0006355
Rops2g03458 336 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 56 272 IPR045174 GO:0003700|GO:0006355
Rops2g03458 336 Pfam Dof domain, zinc finger 67 123 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03458 Rops-Chr2 63737250 63738647 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03458 65 172 C2C2-Dof Transcription Factor Family AT1G51700 53.153 8.30e-34 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Rops2g03458 zf-Dof 2.8e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03458 - - gmx:778100 399.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g01743 1 36258119 36259406 Rops2g03458 2 63737250 63738647 PCT