Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02544 ATGTTTGCTAATCGGAGACCCCTTTTGCGGCCATTACGATTCACCGCTACAAAATCTAGTTTACGTTCTATGAGTTTGGCAAAAATCTTGGCGCTATGCTTCATAGCTCTTCCATTCTTGTTGGCTCTCAGGCTTGCCCTCTCATACCCATCGTCCGATCCAAACGTGGGTTTCGCTCACGCAAGAATTTTCGACAAAGTGTCTCAAAATGGTTCAGAAGAATTGTCTAAAATGCCAAAAGACAAACTTCTTGGTGGACTCCTTGCTCCTGGGTTTGATGAAGGCTCTTGTTTGAGCAGGTATCAGTCAAGTTTATATCGCAAAACTTCACCCTATAAACCCTCTTCTTATCTCCTCTCCAAGCTTCGAAGTTATGAAGAACTCCATAAACGTTGTGGACCCTATACCGAATCTTACAACAAAACTTTAAAACTACTTCAGTCTGGTCAAATAGTTGGTTCTACAGAGTCGGAGTGTAAATATGTTGTATGGATATCTTTCAGTGGCTTGGGGAACAAAATACTAACAGTGGCTTCAGCATTTCTGTATGCTATCCTTACAAATAGAGTTTTGCTTGTTGACCCGGGAAAGGATATGCCTGATCTTTTCTGTGAGCCATTTCCAGAGAAGTCATGGTTTATGCCCACTGATTTTCCACTTAAAAGTAAGTTTGATATGTATGAGCAAAAGTCTCCTGATTCTTATGGAAACATGCTCAAGAATAACATCTTGAAAACTTCGGTTGAATCGTTGCCCTCATTTTTATATTTACATCTAGTTCATGATTATGGAGACCATGATAAACTTTTCTTCTGTGATCAAGACCAGATGCTTTTTAGCAAAGTTCCCTGGTTAATTATGAAATCTGACAACTACTTTGTTCCATCACTTTTCTTGATCCCTTCTTTTGAGCAAGAACTGAACAGATTATTCCCTGAAAAAGCAACTGTTTTCCACCACCTGGGTCGATATCTTTTTCACCCTTCAAACCAAGTGTGGGGCCTAATTACAAGGTATTATCAGGCTTACTTAGCCAGGGCAGATGAGAGAATTGGCATACAAATCCGAGTTTTTGAAACCGGACCCGGTCCATTTCAATATGTGATGGATCAAATTTTGGCTTGTACTATGAAGCAAAAGGTGCTGCCTGAAGTTGATAAGGAAGAAACTGTCGTCCCTCCATCAGGAAAACCAAACTTAAAAGCTGTTTTGATGACATCCTTGAGTTTTGGGTATTTTGAGAATTTGAGAAATATGTATTGGGAGCAACCTACTGTCAATGGGGATGTAATTGCAGTTTACCAGCCAAGCCATGAAGAATTTCAACAAACAGAAAAGCAATTACACAACAGGAAGGCATGGGCTGAGATGTATCTCCTCAGTCTCACTGATGTGTTAGTCACAAGTTCATGGTCAACATTTGGCTATGTGGCTCAAGGTCTTGGAGGTTTGAAGCCATGGATTCTTTATAAACCCGAGAATCATACAGCACCAGATCCACCTTGTGTTCAAGTAATGTCAATGGAACCATGTTTTCATGCTCCCCCATTTTATGATTGCAAGGCAAAGACTGGAATTGATACGGGTAAACTTGTACCTCATGTAAGGCATTGTGAAGATATGAGTTGGGGCCTTAAGCTAGTTGATAGTCATGATGATTTATAG 1665 0.403 MFANRRPLLRPLRFTATKSSLRSMSLAKILALCFIALPFLLALRLALSYPSSDPNVGFAHARIFDKVSQNGSEELSKMPKDKLLGGLLAPGFDEGSCLSRYQSSLYRKTSPYKPSSYLLSKLRSYEELHKRCGPYTESYNKTLKLLQSGQIVGSTESECKYVVWISFSGLGNKILTVASAFLYAILTNRVLLVDPGKDMPDLFCEPFPEKSWFMPTDFPLKSKFDMYEQKSPDSYGNMLKNNILKTSVESLPSFLYLHLVHDYGDHDKLFFCDQDQMLFSKVPWLIMKSDNYFVPSLFLIPSFEQELNRLFPEKATVFHHLGRYLFHPSNQVWGLITRYYQAYLARADERIGIQIRVFETGPGPFQYVMDQILACTMKQKVLPEVDKEETVVPPSGKPNLKAVLMTSLSFGYFENLRNMYWEQPTVNGDVIAVYQPSHEEFQQTEKQLHNRKAWAEMYLLSLTDVLVTSSWSTFGYVAQGLGGLKPWILYKPENHTAPDPPCVQVMSMEPCFHAPPFYDCKAKTGIDTGKLVPHVRHCEDMSWGLKLVDSHDDL* 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02544 554 Gene3D - 156 212 - -
Rops2g02544 554 PANTHER FUCOSYLTRANSFERASE 2-RELATED 33 549 IPR004938 GO:0008107|GO:0016020|GO:0042546
Rops2g02544 554 FunFam Galactoside 2-alpha-L-fucosyltransferase 157 208 - -
Rops2g02544 554 Pfam Xyloglucan fucosyltransferase 71 521 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02544 Rops-Chr2 41637509 41640404 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02544 23 548 Xyloglucan Fucosyltransferase1 AT2G03220 66.352 0.0 726
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02544 K13681 - cave:132177716 843.573