Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02095 ATGTCGGGTAACTGTGAAAAAACGTTAGTCATCCCTCAAACAACGTCTAACAAATGGACACAGACTCAGATAACAGATGATCAAAAGGTTTCGATGGCTTCCTCTGGTAGGGTTATGGAAAAACCAGGTCAAGAGCTTCTGCAACAGCAACAACAAGCTTTAAGGTGCCCTCGTTGTGACTCATCAAACACCAAATTCTGCTACTACAACAACTATAGCTTGTCACAGCCTAGGCACTTTTGCAAAGCTTGCAAGAGATATTGGACAAGAGGTGGAACTCTTAGGAACGTTCCTGTAGGTGGTGGATGCAGAAAAAACAAGCGTGTTAAGAGACCAACCTCTTCTTCAACCATTGATACTACTGCTTCTACTTCTTCTTCTTCCACTCCTAGTGCCAATTCAAACCCTCCTTCACAACCCCAGATCGAAAACATCAATCCTTTGTTTTATGGGTTACCAGGTAACTCTTGTGATGTCATGAATCTTCAGTTCCCTAGGTTTAATTCTAGAGTTTCAACTTCAAGTTCCGGGTATGATGATCTTCAGCCTCATCAGCTGAATGCCCTTGGATTAGGTTTTTCATCAGGGTTATTGTCAAGTGAAGTAAGTGATAATGGTTATAGAAACGGGTTTGGTTCAAATAACACGTTTCTTTCAAATTACAATTCCATCTTTGGTTCTTCTACTTCAACTTCCATGCCCTCTACTCCAGTTATGGCTTCCTTGCTGAGCTCTACTCTCCTTCAACAAAAATTCATCAGTGGTGGAGTGAAAGGTGATCCGGGTGGCAACATTTTCCATGGCTTGACCCCTTTTGAAGAGCTTCAAGTTCAAATGGAAGGTCATGGCACTGAGGGAGGGATGATGGCTTCAAAAGAAGTGAAAGTTGAAGGACAAAATAGGTTGGAGTGGAATAATGGTGCTGTTTGTCAAAACCAGGTTGAGCATATGGGCTTGTCTGATCCTTCACTTTATTGGAATAACACATCAACAGGTTTGGGTGCTTGGAGTGATCAACCTAATATTGGTCCTTCAGTCACTTCTCTGATCTAG 1053 0.4217 MSGNCEKTLVIPQTTSNKWTQTQITDDQKVSMASSGRVMEKPGQELLQQQQQALRCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRVKRPTSSSTIDTTASTSSSSTPSANSNPPSQPQIENINPLFYGLPGNSCDVMNLQFPRFNSRVSTSSSGYDDLQPHQLNALGLGFSSGLLSSEVSDNGYRNGFGSNNTFLSNYNSIFGSSTSTSMPSTPVMASLLSSTLLQQKFISGGVKGDPGGNIFHGLTPFEELQVQMEGHGTEGGMMASKEVKVEGQNRLEWNNGAVCQNQVEHMGLSDPSLYWNNTSTGLGAWSDQPNIGPSVTSLI* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02095 350 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 42 211 IPR045174 GO:0003700|GO:0006355
Rops2g02095 350 ProSitePatterns Zinc finger Dof-type signature. 56 92 IPR003851 GO:0003677|GO:0006355
Rops2g02095 350 Pfam Dof domain, zinc finger 52 108 IPR003851 GO:0003677|GO:0006355
Rops2g02095 350 ProSiteProfiles Zinc finger Dof-type profile. 54 108 IPR003851 GO:0003677|GO:0006355
Rops2g02095 350 MobiDBLite consensus disorder prediction 99 145 - -
Rops2g02095 350 MobiDBLite consensus disorder prediction 113 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02095 Rops-Chr2 33323486 33324733 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02095 1 350 C2C2-Dof Transcription Factor Family AT1G28310 38.859 8.18e-43 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Rops2g02095 zf-Dof 3.8e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02095 - - gmx:778098 367.081