Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02094 ATGGAGCAAGAAGGAGAAGGTATAGAAGGGAATAATAGACAACCGCTTCAGCAACAGAGATGTCCACGCTGTGATTCTATGAACACCAAGTTCTGTTATTACAACAATTATAGCCTTTCACAGCCTCGTTATTTTTGCAAAGCGTGTAAAAGGTACTGGACACAAGGTGGAACCTTCAGGAACATACCCATTGGAGGTAGTTCCCATAAGAGAAAGCGAACCAAAAGATCTTCTTCATCTTCCATGTCACAGTTACATCAACAACTGCTGCAAGAGGTGGTTCAAAACCAGCCAAATATGACAACTTTGGCGAGGCCTTCTTTACCCTTGGTGGTTCACTCAACCAACCCATCACAGCCTTTGAATCAGTCTCTGAAAGTTGGAGGTGATGTTGTGACTTCTTCTAATTCACCACGTCTATCTGGTTTTAACGCTGCTTCTCTTCTTGGCTCACAACAACACCACCTGAGCCAAATTCCACAAGGTGTGATTCCATCGAGCGTGGCTAATAACGGTGTTGCTTCTCACTTTGATCAATGGCCACAAAGCTTCATCAGTAGTAATGCTAACAATAGGGCTTCTGATTCTTCTGTATGGAGTACTATCAGCACTACCACTTCCATTAGTGGTAACTCTGATCAGAACAATATCAGAGGTGGCGACTCTTCTTCTTTGAACCCAAATCATTGGCCTCATCTCCCTGGGTATGGCCCTGCTCAATAA 723 0.4385 MEQEGEGIEGNNRQPLQQQRCPRCDSMNTKFCYYNNYSLSQPRYFCKACKRYWTQGGTFRNIPIGGSSHKRKRTKRSSSSSMSQLHQQLLQEVVQNQPNMTTLARPSLPLVVHSTNPSQPLNQSLKVGGDVVTSSNSPRLSGFNAASLLGSQQHHLSQIPQGVIPSSVANNGVASHFDQWPQSFISSNANNRASDSSVWSTISTTTSISGNSDQNNIRGGDSSSLNPNHWPHLPGYGPAQ* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02094 240 MobiDBLite consensus disorder prediction 205 229 - -
Rops2g02094 240 MobiDBLite consensus disorder prediction 1 20 - -
Rops2g02094 240 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 13 203 IPR045174 GO:0003700|GO:0006355
Rops2g02094 240 ProSitePatterns Zinc finger Dof-type signature. 21 57 IPR003851 GO:0003677|GO:0006355
Rops2g02094 240 MobiDBLite consensus disorder prediction 60 86 - -
Rops2g02094 240 MobiDBLite consensus disorder prediction 205 240 - -
Rops2g02094 240 ProSiteProfiles Zinc finger Dof-type profile. 19 73 IPR003851 GO:0003677|GO:0006355
Rops2g02094 240 Pfam Dof domain, zinc finger 18 73 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02094 Rops-Chr2 33264872 33272202 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02094 15 80 C2C2-Dof Transcription Factor Family AT3G45610 71.212 6.21e-31 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Rops2g02094 zf-Dof 6.4e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02094 - - gmx:100814555 204.142