Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02030 ATGGGTTTGAGTTCTAAGCAGGTTTCTAGCAGTGGACTTGATTGGAAACAAACCTTATTGGAAGCTCAAAACTTGGAGCTCCCAAAGCCTCATCTGATGAGGAAACAACAACAGCAGCAGCAACAAACTCAGCAATCAGAGTCTTTGAAGTGTCCAAGATGTGACTCTACAAACACCAAATTTTGCTACTACAACAACTACAACAAATCTCAGCCTCGCCATTTCTGCAGAGCTTGTAAGAGGCACTGGACTAAAGGTGGAACTCTACGCAATGTTCCAGTTGGTGGTGGCAGGAAGAATAAGAGGGTCAAAAAATCAACCACCACAACCTCTTCCACCACCAACACAATCACTCCTTCTACTTGCACCACCTCTGTCACCACCTCAATTGGAAATATAGATGGTGGATTGAGTACCCACATGACAATTCAAACTCCTCTTGCAGTTGGTGATCAAAAAAGCATGCCTTCATCTCTCTATCAAGCTCTGATTCGTCCACCATCTTTGCTTCTTCAACAGAATCTGATGAACACTACCAGAGACTTAGAAAGCAAAGATTTTGGTGTTGGTAATAACATCTTTCTGAGTTCAACTTTGCCTCATCCTCAAAACCAGAACCTACTCTTCCCCTTCTCAACCTCAAGCTCTTTTGACACAAACCCTGGTTCATCCTCCAATGTTTATAACTATGGAGAGGAGTATAAAACAATGGAGGAACCAACCATCAATAGGATAATGCCCAGCACTAACACACAGCCATGGGAGATACCAGCAGCAAGTGGTGGCATGGAAACTTCAAACTATTGGAATTGGGAGGATATTGATTCATTGGTCTCCACTGATCTAAAAGATCCATGGGATGATTCTGATATCAAACCTTGA 882 0.4274 MGLSSKQVSSSGLDWKQTLLEAQNLELPKPHLMRKQQQQQQQTQQSESLKCPRCDSTNTKFCYYNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGGRKNKRVKKSTTTTSSTTNTITPSTCTTSVTTSIGNIDGGLSTHMTIQTPLAVGDQKSMPSSLYQALIRPPSLLLQQNLMNTTRDLESKDFGVGNNIFLSSTLPHPQNQNLLFPFSTSSSFDTNPGSSSNVYNYGEEYKTMEEPTINRIMPSTNTQPWEIPAASGGMETSNYWNWEDIDSLVSTDLKDPWDDSDIKP* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02030 293 ProSiteProfiles Zinc finger Dof-type profile. 49 103 IPR003851 GO:0003677|GO:0006355
Rops2g02030 293 MobiDBLite consensus disorder prediction 92 116 - -
Rops2g02030 293 Pfam Dof domain, zinc finger 48 101 IPR003851 GO:0003677|GO:0006355
Rops2g02030 293 ProSitePatterns Zinc finger Dof-type signature. 51 87 IPR003851 GO:0003677|GO:0006355
Rops2g02030 293 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 34 220 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02030 Rops-Chr2 32386704 32388255 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02030 32 115 C2C2-Dof Transcription Factor Family AT1G51700 55.952 9.85e-31 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Rops2g02030 zf-Dof 1.3e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02030 - - gmx:100791855 400.208