Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01542 ATGGGTATGGGTATGGGCAAGGTGGTGATTTGGTTAGCCATCACCGTTTTAGTGGTGGGAGTGGGCTTAGTAGAGGGTCAACCAGAGGCAAATTTCAAGTGCAGTTTGGAGAACGCCACGTGTCACGCCGTAACGGACTATTCCAACCCAAACAGCACCACCCTCCGAACAATCCAAAGGCTGTTCACCGTGAAGCACCTCCCCGACCTCCTAGGCGCCAACAACCTCCCAATCAACACCACAGGCAGTTACAGAGTGGACCCCAACAGGGTCATCAAGGTTCCCTTCCCTTGCAGGTGCACCAACGGCACGGGGCTGTCGGACAAGGTTCCTGTCTACAAAATCAAAGCAGGGGACACGCTCTACGACATAGCAACAATCACTTTCGCGGGTCTTGTTAAGTACCCTCAGATCCAAAAGGCAAATAAGATACCGGACGCTAATAATATCACCGCTGGGGCTACTCTTACGATTCCTCTGCCATGTAGCTGTGATCAGGTGGGTGGCAGCAGTGTGGTGCACTATGCACACAAGGTGGAAACAGGGAGTTCCATAGAAGCCATTGCTCAACAATACGGTACCACACAGCCGATTCTCCTCTCCCTTAACGGTATTAATGACCCCAAAACCCTTCAGGCTGGTCAGATTCTAGATGTTCCCCTCAAAGCTTGTAGCTCGAGTGTGAAAAATGATTCATTGGATTTCCCTTTACTTGTTGCAAATGCTACTTACGCTTACACTGCTAATGAATGTGTCAAATGCAAGTGTGACTCTAGTAACAACTTTATGTTACAATGTGAGCCATCTCAACATAAACCAATCAATAATTGGTCTGTTTGTCCGTCTATGGAATGTTCGAGAAACGTCTCAATTGGCGACATCACTTCTACAGATTCATGTAACCGCACGATTTGTGACTATGCTGGTTATAACTCCAGCAAAATCTCTACCATTCTTGCAACGCAGAACACTTGTGCTGTACCGCCAAGTGGTTCGGCTTCTGGAGGATCAACTGATTCGGATTCAGGAGCTTCAAGGAGCACTTCTCATGGCTGGGTTTGGAGTAATCTTTTCTTTCTCATTCACTTCCTCCTGTTTTATGCCTATCTTTTGTAG 1116 0.4758 MGMGMGKVVIWLAITVLVVGVGLVEGQPEANFKCSLENATCHAVTDYSNPNSTTLRTIQRLFTVKHLPDLLGANNLPINTTGSYRVDPNRVIKVPFPCRCTNGTGLSDKVPVYKIKAGDTLYDIATITFAGLVKYPQIQKANKIPDANNITAGATLTIPLPCSCDQVGGSSVVHYAHKVETGSSIEAIAQQYGTTQPILLSLNGINDPKTLQAGQILDVPLKACSSSVKNDSLDFPLLVANATYAYTANECVKCKCDSSNNFMLQCEPSQHKPINNWSVCPSMECSRNVSIGDITSTDSCNRTICDYAGYNSSKISTILATQNTCAVPPSGSASGGSTDSDSGASRSTSHGWVWSNLFFLIHFLLFYAYLL* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01542 371 Gene3D LysM domain 110 166 IPR036779 -
Rops2g01542 371 ProSiteProfiles LysM domain profile. 175 219 IPR018392 -
Rops2g01542 371 SMART LysM_2 112 159 IPR018392 -
Rops2g01542 371 SMART LysM_2 176 220 IPR018392 -
Rops2g01542 371 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 13 327 - -
Rops2g01542 371 SUPERFAMILY LysM domain 175 220 IPR036779 -
Rops2g01542 371 ProSiteProfiles LysM domain profile. 111 158 IPR018392 -
Rops2g01542 371 CDD LysM 112 158 IPR018392 -
Rops2g01542 371 CDD LysM 177 219 IPR018392 -
Rops2g01542 371 Pfam LysM domain 113 159 IPR018392 -
Rops2g01542 371 Pfam LysM domain 177 220 IPR018392 -
Rops2g01542 371 SUPERFAMILY LysM domain 112 160 IPR036779 -
Rops2g01542 371 Gene3D LysM domain 167 233 IPR036779 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01542 Rops-Chr2 22923186 22925100 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01542 24 317 LysM Receptor-like Protein (LYPs) Gene Family AT2G17120 48.475 4.48e-90 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01542 - - lang:109351135 501.901