Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01541 ATGAGATTCTCAGCGGTGTGCTTTGTCTTGTTATTATTGGTGTTAGAAGCAGCAGCTACATGTTTCACTTTCAACAGAGATAAAATGTTATCAGAATTCAAGCACAAACTTGAGCAACAATTAGCTAGTAGTAGTCCTCCCTTGGCATCAGCTTCTTCAGAAACAAACATGAGTGGGAGGGTGTTGTACCTGAGTGAATATGGTGCAGACCCAACAGGATTAGAAGAGAGTAGTGATGCCATTTTGAAAGCAGTGGAGGATGCTTTTGAGTTGCATAAAGGTCTTGAATTGGTAGCAGGGGTGAATGACCTTGGAGGTGTTGTCATAGATTTGCAAGGTGGAAACTACAAAATCAGCAAACCCATTACTTTCCCTTCCTCTGGGGGTGCCAATGTCCTGGTAAAAGGAGGAACCTTGAGAGCATCTGATACTTTTCCTGGTGATCGACATTTAATTGAGCTATGGTCATCAAATTCCAAGAAAATTGTGACAACAGAATCTTTACATGGTGATGACCTAAATGACAATAAAGCCCAAGACAATGGAATTTACTATGAAGACATAACCTTCAGGGACATCCTCTTTGATTCAAGCTATAGAGGAGGTGGGATTTTCATTGTTGATTCTGCTAGAACCCGGATCAACAATTGCTTCTTCTTGCATTTCACCACACAAGGAATTCTAGTCCAGAAAGGACATGAAACCTTCATATCAAGTTGTTTTCTTGGGCAACACTCAACAGTTGGTGGTGACAAAGGTGAGAGGGATTTTTCTGGGGTGGCCATTGATCTTGCTAGCAATGATAATGCAGTCACAGATGTTGCAATTTTCTCAGCAGCCATTGGTGTTGTGCTAAGGGGTCAAGCTAATATTCTAACTGGGGTACATTGTTATAACAAGGCGACATCTTTTGGTGGCATAGGCATCTTAGTGAAATTGGCAGGGAATTCACAAACTAGAATTGATAACTGTTATCTGGATTATACTGGTATAGTCATGGAAGACCCTGTTCAAGTTCATGTCACTAATGGGTTATTTCTAGGGGATGCTAATCTTTCATTGAAGTCTATTAAAGGTCAAATTTTGGGCTTGAATATAGTGGATAATATGTTTAGTGGTGACCCCAATAAGAAGGTTCCAATTGTGAATCTAGATGGGGAGTTTAGTAACATTGATCAAGTGGTGATTGATAGAAACAATGTGAATGGCATGGGCTTGAGATCAACGGTTGGGAAGTTAACTGTGAGTGGAAATGGCACAAAGTGGGTAGCTGATTTTTCATCAGTTTTGGTATTTCCTAATCGGATTAGGCATTTTCATTATTCATTTTATGCTCAAGATGAGCCAAAATTTGTAGCACATTCTGTGACCAATGTCTCAGATAATGTTGTAACTGTGGAGACTGAGAAAGAAGCTAAAGGGTCGGTCTCCTTCATTGTGGAACAATAA 1449 0.401 MRFSAVCFVLLLLVLEAAATCFTFNRDKMLSEFKHKLEQQLASSSPPLASASSETNMSGRVLYLSEYGADPTGLEESSDAILKAVEDAFELHKGLELVAGVNDLGGVVIDLQGGNYKISKPITFPSSGGANVLVKGGTLRASDTFPGDRHLIELWSSNSKKIVTTESLHGDDLNDNKAQDNGIYYEDITFRDILFDSSYRGGGIFIVDSARTRINNCFFLHFTTQGILVQKGHETFISSCFLGQHSTVGGDKGERDFSGVAIDLASNDNAVTDVAIFSAAIGVVLRGQANILTGVHCYNKATSFGGIGILVKLAGNSQTRIDNCYLDYTGIVMEDPVQVHVTNGLFLGDANLSLKSIKGQILGLNIVDNMFSGDPNKKVPIVNLDGEFSNIDQVVIDRNNVNGMGLRSTVGKLTVSGNGTKWVADFSSVLVFPNRIRHFHYSFYAQDEPKFVAHSVTNVSDNVVTVETEKEAKGSVSFIVEQ* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01541 482 PANTHER POLYGALACTURONASE QRT3 12 482 IPR039279 GO:0004650
Rops2g01541 482 Gene3D - 65 479 IPR012334 -
Rops2g01541 482 SUPERFAMILY Pectin lyase-like 59 404 IPR011050 -
Rops2g01541 482 FunFam Polygalacturonase QRT3 64 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01541 Rops-Chr2 22915729 22921336 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g01541 2 22915729 22921336 Rops2g01541 2 22915729 22921336 ECH