Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01537 ATGACCTCTCCTTTTCCTTACACATTCCCTATCAGTGCTGCTGCTGGTAGTAGCAACATCACCACTGCCACAGGCACTTACAACAACACTCCATGGATGAATAGCAGGATATGGAGTAAGCTCCCTCAAAGGCTTCTTGACCGTGTCCTAGCCTTTCTTCCTCCACCTGCTTTCTTTCGTGCACGTTGTGTTTGCAAGAGATGGTATGGTCTTCTGTTTTCCAACACCTTTCTTGAATTATACCTCCAAGTTTCCCCTCGCCGCCATTGGTTCATGTTCTTCAAGCACAAAACCCGGAAAAGCTACATCTACAAGAACAACAACAACAATGGTGGTTGTGCCTCATGTGAAGAAGGGTACCTGTTTGATCCCTATGACATGGCTTGGTACCGCATTTCCTTTGCTTTGGTTCCTTCTGGCTTCACTCCAGCCTCTTCATCTGGTGGTTTACTCTGTTGGGTTTCAGATGAGGCTGGCCCAAAGACCATGCTTCTTTGCAACCCTATACTTGGTTCTCTCACTCAGTTACCTCCAACATTGAGACCAAGACTTGTCCCTTCCATTGGCCTAACCATTAGCCCCACTTGCATAGATGTTACTGTTGCTGGGGATGACATGATATCTCCTTATGCAGTGAAGAACTTGACATCTGAAAGCTTTCACATTGATGGAGGTGGGTTTTATTCCATATGGGGAACCACTTCTTCTCTGCCAAGGCTCTGCAGCCTTGAATCTGGTAGAATGGTCTATGCAGAAGGGAAATTCTACTGCATGAATTGTAGCCCTTTTAGTGTGTTGGCTTATGACATAACATCAAACACTTGGTTCAAAATCCAAGCCCCAATGAGGAGATTCCTAAGGTCTCCAAGCTTGGTTGAATGCAAAGGAAAACTGCTCCTTGTTGCGGCTGTTGAGAAGAGTAAGCTGAACGTACCAAAGAGTTTAAGGGTATGGAGCCTGCAAGCTTGTGGGACAATGTGGGTGGAATCAGAGAGAATGCCACAGCAACTTTACATTCAGTTTGCTGAATTGGAAGTTGGGAATGGGTTTGAATGTGTAGGGCATGGTGATTTTATTGTTATCATGATTAGAGGAACGGACAAGGCTTTGTTGTATGATATATCAAGGAAGAGATGGCAGTGGATTCCATCATGCCCCTACACTGCATATGATGCATATGAATTGCATGCTTTTGCCTATGAACCTAGATTGGCCACCCCAGTTACTGCTCTCCTTGATCAATTGGCACTGCCCTTCAACAGTTTTAATGCTTAA 1275 0.4502 MTSPFPYTFPISAAAGSSNITTATGTYNNTPWMNSRIWSKLPQRLLDRVLAFLPPPAFFRARCVCKRWYGLLFSNTFLELYLQVSPRRHWFMFFKHKTRKSYIYKNNNNNGGCASCEEGYLFDPYDMAWYRISFALVPSGFTPASSSGGLLCWVSDEAGPKTMLLCNPILGSLTQLPPTLRPRLVPSIGLTISPTCIDVTVAGDDMISPYAVKNLTSESFHIDGGGFYSIWGTTSSLPRLCSLESGRMVYAEGKFYCMNCSPFSVLAYDITSNTWFKIQAPMRRFLRSPSLVECKGKLLLVAAVEKSKLNVPKSLRVWSLQACGTMWVESERMPQQLYIQFAELEVGNGFECVGHGDFIVIMIRGTDKALLYDISRKRWQWIPSCPYTAYDAYELHAFAYEPRLATPVTALLDQLALPFNSFNA* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01537 424 FunFam protein UNUSUAL FLORAL ORGANS 34 78 - -
Rops2g01537 424 SUPERFAMILY F-box domain 31 130 IPR036047 GO:0005515
Rops2g01537 424 Gene3D - 33 78 - -
Rops2g01537 424 ProSiteProfiles F-box domain profile. 35 84 IPR001810 GO:0005515
Rops2g01537 424 SMART fbox_2 41 81 IPR001810 GO:0005515
Rops2g01537 424 SUPERFAMILY Galactose oxidase, central domain 62 388 IPR011043 -
Rops2g01537 424 Gene3D - 91 403 IPR015915 GO:0005515
Rops2g01537 424 Pfam F-box domain 38 70 IPR001810 GO:0005515
Rops2g01537 424 PANTHER BNACNNG10540D PROTEIN 25 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01537 Rops-Chr2 22885613 22886887 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g01537 2 22885613 22886887 Rops2g01537 2 22885613 22886887 ECH