Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01210 ATGGCTCAAGTACAAGAGAGTGAAGGGATTAAGCTATTTGGAACAACGATTACATTGCATGGAAGAAAAAGAAATGAAGATGAAAATAGCAATGAAGATGGGAGAGAGGAGAAGAAGCCTAATGAGATTATACCGTGCCCTAGATGTAAGAGCATGGAAACCAAGTTTTGTTACTTCAATAATTACAACGTTAATCAGCCTAGGCATTTTTGTAAGGGTTGCCAAAGGTACTGGACGGCCGGTGGGGCCCTCCGTAATGTTCCGGTAGGGGCTGGCCGGAGAAAGGTTAAACCGCCATGTCGTGGCTCCGGTGGGTTCCCGCACGGTGGCCTTTATGATGCTTCCACCGTTCAGCAATTTGGTTTGGATGAATGGCATGTTGCCGCCATGGTTCACGGTGACTTCCGGCAGCTTTTTTCAACTAAAAGACCGAGGACCAGCTCAGCTCAGCATGAAGGTCAATAA 465 0.471 MAQVQESEGIKLFGTTITLHGRKRNEDENSNEDGREEKKPNEIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKVKPPCRGSGGFPHGGLYDASTVQQFGLDEWHVAAMVHGDFRQLFSTKRPRTSSAQHEGQ* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01210 154 ProSiteProfiles Zinc finger Dof-type profile. 44 98 IPR003851 GO:0003677|GO:0006355
Rops2g01210 154 MobiDBLite consensus disorder prediction 1 41 - -
Rops2g01210 154 Pfam Dof domain, zinc finger 43 97 IPR003851 GO:0003677|GO:0006355
Rops2g01210 154 MobiDBLite consensus disorder prediction 20 41 - -
Rops2g01210 154 ProSitePatterns Zinc finger Dof-type signature. 46 82 IPR003851 GO:0003677|GO:0006355
Rops2g01210 154 PANTHER CYCLIC DOF FACTOR 2 27 97 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01210 Rops-Chr2 17447666 17449691 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01210 4 148 C2C2-Dof Transcription Factor Family AT2G34140 55.215 1.62e-54 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Rops2g01210 zf-Dof 9.5e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01210 - - gmx:100527802 228.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g01210 2 17447666 17449691 Rops2g01210 2 17447666 17449691 ECH