Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00916 ATGCACCAGCTGCCATTGCAAAGTACTTTCCACCCCATGAAAGAGAAGATGTGTCGGATTCAATATCCTATGTTCATCTCCTTAATGACTTGCAAGATACTACTTTGGGTTCTCTCCTCTCAGCTCTCATGCAACACTGTATGCCACCCCAAAGAAGATTCCCCACCCTGGTGGCCCAATGGGACAGAACAATGGTGGGGTGAACAAGGACTTCTGGCTCAAGAACATGGTTCACCTCCTTATAAGAAGCCCCATGATCTTAAAAAGGGTTGGAAAGTTTCTGTCTTGGCTGCAATCCTCAAGCATATGTCTCCTGATTTGGAGAAAGTGAGAAGGTTGGTGACTCAGTCAAGGACTTTGCAAGATAAGATGACAGCCAGAGATACTGCAACTTGGTCCAAAGTGGTGAACCAGGAAGAAGCTTTGATGCAACTCACTGACAAGTGCCTCAAAATATCTCCATCATCAGAGGAAGATGAAAACCAAGAAGGTGAAAGCTCTGCTTCTAGCCATGTTTTGAATGAAGGGAGTAGTACTAGTAGCAGCAGTGAGAAGAGGAAGAGTGTGTTGGATTTAGATGCTGATCTTGATAAGCTATATGCTTGTCAATACACTCAGTGTCCACAAAGTGAACTGTGTATGGAATTTCAGGATAAAAGTTCAAGGAAGAACCATGAGTCCCTCTGTGCTTACCGCAACGAGCAAAGCCAAGTTCCATTACATGATTATCTGTCCAATGACACAAGGATGGCAAGTGTAGATGATTCGATGAATATGGAACTCGCAAGGGCTAATCAGAGTCAGAATGATCTTGTTGGGCATGTGAATGAGTTTGGAGACATTGTGGGTAGAACACCAGAAGATTATGGAGGCTTATGGCTAAATGGCATTGAAGATCTTGAATTGCACTCGGCACAAGAGACTCCACAGGGCCATGAAGCAACCTCAATTTGGGACTTAACGTACAAATAA 972 0.4393 MHQLPLQSTFHPMKEKMCRIQYPMFISLMTCKILLWVLSSQLSCNTVCHPKEDSPPWWPNGTEQWWGEQGLLAQEHGSPPYKKPHDLKKGWKVSVLAAILKHMSPDLEKVRRLVTQSRTLQDKMTARDTATWSKVVNQEEALMQLTDKCLKISPSSEEDENQEGESSASSHVLNEGSSTSSSSEKRKSVLDLDADLDKLYACQYTQCPQSELCMEFQDKSSRKNHESLCAYRNEQSQVPLHDYLSNDTRMASVDDSMNMELARANQSQNDLVGHVNEFGDIVGRTPEDYGGLWLNGIEDLELHSAQETPQGHEATSIWDLTYK* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00916 323 MobiDBLite consensus disorder prediction 152 187 - -
Rops2g00916 323 Gene3D - 10 149 IPR023278 GO:0003700|GO:0005634
Rops2g00916 323 MobiDBLite consensus disorder prediction 166 185 - -
Rops2g00916 323 SUPERFAMILY DNA-binding domain of EIN3-like 48 143 IPR023278 GO:0003700|GO:0005634
Rops2g00916 323 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 54 252 IPR006957 GO:0003700|GO:0005634
Rops2g00916 323 Pfam Ethylene insensitive 3 54 140 IPR047091 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00916 Rops-Chr2 12848056 12849800 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00916 54 246 EIL Transcription Factor Family AT5G10120 50.259 7.87e-54 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Rops2g00916 EIN3 8.6e-36 No_clan