Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00184 ATGAGAACCCAACGGCCTCACCATCTCCTCCTATCCATCCTCTTCTTTGCAGCCACATTCTCCATCTTCCACCCCGCAGCCACCGCCGGAGAAGCGGAACCTCCCATCGCCGGCGACGATGACGACGCCGAATTCATCCGCACCAGTTGCAACACCACACTCTACCCTGACATCTGCTACACCTCCCTCTCTCGTTACGCCAATGCAGTCCAACAAAACCCTTGTCAACTCGCTCGCGTCGCCATAGCCGTGAGTCTCTCAAAGGTTCACCGCACAGCCTCCTACCTCTCCAATCTCACTCGCGATGCCGATTACGGTGGAAACTCTCGCACAGCTCTGGCTCTCCACGACTGCTTCTCCAACCTCGACGACGCCGTTGATGAAATCCGTGGCTCGCTGAAACAGATGCGGCAAATAGGTGCCGCCGGTGCTGGCTCCGGCTCGTTCCTTTTCCAAATGAGCAACGTGCAAACGTGGATGAGTGCGGCGCTCACCGATGAAGAGACTTGTACGGATGGATTCCAGGATGTACCGGAGTGTCCGATGAAAACGGATGTATCTGATCGTGTCACGACAGTGAAGAAATTCACTAGCAATGCTTTAGCGCTCGTGAATAGCTATGCAAACGAGGGAATGCCTTGA 642 0.5514 MRTQRPHHLLLSILFFAATFSIFHPAATAGEAEPPIAGDDDDAEFIRTSCNTTLYPDICYTSLSRYANAVQQNPCQLARVAIAVSLSKVHRTASYLSNLTRDADYGGNSRTALALHDCFSNLDDAVDEIRGSLKQMRQIGAAGAGSGSFLFQMSNVQTWMSAALTDEETCTDGFQDVPECPMKTDVSDRVTTVKKFTSNALALVNSYANEGMP* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00184 213 Gene3D Invertase/pectin methylesterase inhibitor family protein 41 207 IPR035513 -
Rops2g00184 213 SMART PMEI_2 41 203 IPR006501 GO:0004857
Rops2g00184 213 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 44 206 IPR035513 -
Rops2g00184 213 NCBIfam pectinesterase inhibitor domain 12 207 IPR006501 GO:0004857
Rops2g00184 213 FunFam Pectin methylesterase inhibitor 1 41 207 - -
Rops2g00184 213 Pfam Plant invertase/pectin methylesterase inhibitor 45 203 IPR006501 GO:0004857
Rops2g00184 213 PANTHER PECTINESTERASE INHIBITOR-LIKE 11 203 - -
Rops2g00184 213 CDD PMEI-like_3 48 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00184 Rops-Chr2 2815992 2816633 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00184 20 203 Carbohydrate Esterase AT5G53370 27.128 4.73e-12 62.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00184 2 2815992 2816633 Rops2g00184 2 2815992 2816633 ECH