Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops1g01818 | ATGGCTGAACAACACTCTCCTTCATTACTCTGTGAAGAACAACAAAATTTTAAGGAAGAAGAAGATTCTGGAGTCATAAAGCCTCCAACTTTACCTTCGATTTTGCTCGAGAAGGAACATGATGACCTTCTCTCTCTAATCTCCAAAGAAAGAGACACCCGTTTCTGTTCTGATATTGTAACTCTTCTTGAGGGTACTCGCCATGATGCTGTGCTCTGGATTTGTAGAGTTTCAACGCACTATGGTTTCACTGCTTTGACCACTGTTCTTGCCGTTAACTACTTTGATAGGTTCATAACGAGCCTACAGCTTCAGAGGGACAAGCCATGGATGACTCAGCTCACCGCAGTTGCTTGTTTATCTCTTGCTGCCAAAATTGAAGAGACCCAGGTGCCTCTGCTTTTGGAATTCCAAGTGGAGGAATCAAAATTTGTGTTTGAAGCAAAGACCATACAGAGAATGGAGCTCCTAGTTTTGTCCACTCTTCAATGGAGGATGAACCCTATCACCCCAATTTCCTTCTTTCAACACATTGTTAAAAGGCTTGGTTTCAAGAGTTGCTTACATTGGGAGTTTCTGTGTAGTTGTGAACAAGTTCTTCTATGTGTCATTGCGGATTTAAGGGTGATGAGTTATCTTCCTTCTACATTGGCTGCTGCTATAATGATCCACGTTATTAAAGAAATTGAACCATTTAATGCACTGGAATACAGAAATAAACTTCTGGGTTTACTCAAAATTAGTGAGGAGCAAGTGAATGAGTGCTACAAACTCATGCTGAAACTATTAGTTTGCTATGAAGGCATTCACAACATTCACCAAAAACACAAACGTCTATCTGAACCAAGCAGCCCAGGTGGGGTCATTGATGCATCTTTCAGCTGTGACAGCACAAATTATTCAATGACTCTGGCATCAGCAGTCTCACTATCACCTGAGCCAGTGTTTAAGAGGAGCAAAGCTCAGTTCATTGATGTTCTAGACAGTCCTCGTTAA | 996 | 0.4137 | MAEQHSPSLLCEEQQNFKEEEDSGVIKPPTLPSILLEKEHDDLLSLISKERDTRFCSDIVTLLEGTRHDAVLWICRVSTHYGFTALTTVLAVNYFDRFITSLQLQRDKPWMTQLTAVACLSLAAKIEETQVPLLLEFQVEESKFVFEAKTIQRMELLVLSTLQWRMNPITPISFFQHIVKRLGFKSCLHWEFLCSCEQVLLCVIADLRVMSYLPSTLAAAIMIHVIKEIEPFNALEYRNKLLGLLKISEEQVNECYKLMLKLLVCYEGIHNIHQKHKRLSEPSSPGGVIDASFSCDSTNYSMTLASAVSLSPEPVFKRSKAQFIDVLDSPR* | 332 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops1g01818 | 331 | SUPERFAMILY | Cyclin-like | 151 | 277 | IPR036915 | - | |
Rops1g01818 | 331 | CDD | CYCLIN_AtCycD-like_rpt1 | 67 | 164 | - | - | |
Rops1g01818 | 331 | FunFam | CYCLIN D32 | 168 | 257 | - | - | |
Rops1g01818 | 331 | Gene3D | - | 168 | 257 | - | - | |
Rops1g01818 | 331 | SMART | cyclin_7 | 72 | 160 | IPR013763 | - | |
Rops1g01818 | 331 | PANTHER | CYCLINS | 40 | 270 | IPR039361 | - | |
Rops1g01818 | 331 | FunFam | D6-type cyclin | 54 | 167 | - | - | |
Rops1g01818 | 331 | SUPERFAMILY | Cyclin-like | 38 | 167 | IPR036915 | - | |
Rops1g01818 | 331 | SMART | Cyclin_C_2 | 169 | 297 | IPR004367 | - | |
Rops1g01818 | 331 | CDD | CYCLIN_AtCycD-like_rpt2 | 169 | 259 | - | - | |
Rops1g01818 | 331 | Pfam | Cyclin, N-terminal domain | 64 | 167 | IPR006671 | - | |
Rops1g01818 | 331 | Gene3D | - | 62 | 167 | - | - | |
Rops1g01818 | 331 | Pfam | Cyclin, C-terminal domain | 169 | 276 | IPR004367 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops1g01818 | Rops-Chr1 | 37415035 | 37416545 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops1g01818 | 8 | 322 | Core Cell Cycle Gene Families | AT5G67260 | 48.521 | 1.57e-97 | 292 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Rops1g01818 | 1 | 37415035 | 37416545 | Rops2g04491 | 2 | 82095073 | 82096888 | ECH | |
Rops10g01122 | 10 | 23274087 | 23276015 | Rops1g01818 | 1 | 37415035 | 37416545 | ECH | |
Rops9g02182 | 9 | 39938520 | 39940150 | Rops1g01818 | 1 | 37415035 | 37416545 | ECH | |
Rops1g01818 | 1 | 37415035 | 37416545 | Rops1g01818 | 1 | 37415035 | 37416545 | ECH | |
Rops1g01818 | 1 | 37415035 | 37416545 | Rops6g03152 | 6 | 55006850 | 55008410 | PCT | |
Rops2g04491 | 2 | 82095073 | 82096888 | Rops1g01818 | 1 | 37415035 | 37416545 | PCT |