Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00760 ATGGCGTCACAAATGTCGATCCTCCATCGAACTCGTTCCCTCCTCACCAAATCCACCACCATCAAAACCATCACCACATTCCCCTTCCTCTCCCAAGAAGCAGAACTTGCGGACCCCACACCCACCACCACCACCACTCCGACAACAACAACAACCTCACTCCCTCCGAACCCAGCCTCCGGCAGCCCACTCTACAACGAAAACTGGCGAAACCCAATTCCCCGATTATCCTCACCCCACGCGCTTGCCCCAGTCGGGTTCTTCAATCGCGCTTCCGTTTCAGACACCTACGATTCCCAAACGCTTCTCGACCTCTTCGGAAACTGGGTTGCATCGCAAAAGTGGCAAGACGTTAAGGACTTGTTCGAGGCTTGGGTTAGGTCACTTGACAAAAATGGGAAACCAAACAAGCCTGATGTTAATCTCTTTAATCATTATCTTAGGGCTAATCTCATGATCGGAGCCTCTGCCGGTGAATTGCTCGATTTGGTCGCTCAGATGGAACACTTCGATATCGCTCCCAATACGGCGTCGTTTAATCTTGTGCTCAAGGCCATGCACCGGGATGGTGAAACTGTTGCCGCTGGGAAACTTCTGGAACGGATGCTGCAGACAGGAAATGAGTCTCTCCCTGATGAGGAATCATATGACTTGGTCATTGCTATGCTCTTTTTGACAGACCAGATTGATGCTGCATTCAAATATATAGATTTAGCTTTGAAATCTGGTTACAGTTTGTCGATGAAGGTATTTATGGACTGTGTGAGGAGTTGTGTCAAGAAGCGAAGGCTTGATACATTGGAGACAATAATTGAAAGGTGCAGGACAACAGATCAAAACAAAGCTCTTTGCCCCTCCTGGAACTTGTCCAATTTTATTGCTGAAGTTGCAATTCGAGAGGATAATAGCAAGTTAGCCTTTTATAGCCTGGAGTTTATGGCTAGATGGATTGTCAAGGGTGAACGCGCAAGTCCCCGTGTGTTGTTATCTGTGGATGAAGGTTTAGTTGTGTCAGCTCTTTTGACTGCAGGTAGAACCTATAATTCTGAGCTGCTAGGGGCAGCATGGGCTGTTTTGGACCGCTCATTGCGTAAAAAGAAAGTTCCGAATCCAGAATCATATCTTGGAAAAATATATGCCCTTGCATCAATGGGGAATCTACAAAAGGCTTTTGGTACTCTGCATGAGTATGAGTCTGCTTATGGAGATTCCAATCAAGAAGCTGAAGACTTGTTCTGCCCATTTACATCTTTACATCCATTGGTTGTGGCATGCTCCAAGAAGGGTTTTGAGACTTTGGATACTGTTTATTTCCAACTGGAGAAATTAAGCAATGCAGAGCGTCCATATAAATCTGTTGCTGCACTAAACTGCATCATTTTAGGATGTGCGAACATATGGGACCTCGATCGTGCTTACCAAACGTTTGAATCAATTGGATCTACTTTTGGGTTGACCCCTGATATTCATTCATACAATGGGCTGATGTATGCCTTTGGGAAGCTCAAGAAGACGCATGAAGCTTCAAGGGTGTTTGAGCATCTAGTGAGTTTGGGTCTCAAACCTAATGCAAGATCATATTCTCTGCTTGTTGATGCCCACCTGATTAACCGGGATGTCAAATCTGCTCTGGCAGTGGTTGATGATATGATGGCTGCTGGATTTGAACCATTGAAAGAGACACTAAAAAAGAAGCCCGGCGAGACATGCTGTTTAATCTTGATTATAGTATGGGTTATGCTTGAATGGTTCACTTGTCTTTGGTGTCCAAATGAATTATTTAAGCTAATCGGCAAATCTTTTATTGCATGCATTTCCAAGGGAATCCCTGTATGTATATTAATGGATGCTGCTGAGGTTTGCCATGGCAGGATGATGCAAAGATAG 1887 0.4494 MASQMSILHRTRSLLTKSTTIKTITTFPFLSQEAELADPTPTTTTTPTTTTTSLPPNPASGSPLYNENWRNPIPRLSSPHALAPVGFFNRASVSDTYDSQTLLDLFGNWVASQKWQDVKDLFEAWVRSLDKNGKPNKPDVNLFNHYLRANLMIGASAGELLDLVAQMEHFDIAPNTASFNLVLKAMHRDGETVAAGKLLERMLQTGNESLPDEESYDLVIAMLFLTDQIDAAFKYIDLALKSGYSLSMKVFMDCVRSCVKKRRLDTLETIIERCRTTDQNKALCPSWNLSNFIAEVAIREDNSKLAFYSLEFMARWIVKGERASPRVLLSVDEGLVVSALLTAGRTYNSELLGAAWAVLDRSLRKKKVPNPESYLGKIYALASMGNLQKAFGTLHEYESAYGDSNQEAEDLFCPFTSLHPLVVACSKKGFETLDTVYFQLEKLSNAERPYKSVAALNCIILGCANIWDLDRAYQTFESIGSTFGLTPDIHSYNGLMYAFGKLKKTHEASRVFEHLVSLGLKPNARSYSLLVDAHLINRDVKSALAVVDDMMAAGFEPLKETLKKKPGETCCLILIIVWVMLEWFTCLWCPNELFKLIGKSFIACISKGIPVCILMDAAEVCHGRMMQR* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00760 628 PANTHER OS07G0599000 PROTEIN 1 564 IPR044605 -
Rops1g00760 628 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 523 557 IPR002885 -
Rops1g00760 628 Gene3D Tetratricopeptide repeat domain 431 569 IPR011990 GO:0005515
Rops1g00760 628 Pfam PPR repeat family 487 533 IPR002885 -
Rops1g00760 628 MobiDBLite consensus disorder prediction 35 64 - -
Rops1g00760 628 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 488 522 IPR002885 -
Rops1g00760 628 Gene3D Tetratricopeptide repeat domain 104 311 IPR011990 GO:0005515
Rops1g00760 628 NCBIfam pentatricopeptide repeat 490 524 IPR002885 -
Rops1g00760 628 NCBIfam pentatricopeptide repeat 526 557 IPR002885 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g00760 1 18964028 18968156 Rops1g00760 1 18964028 18968156 ECH