Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00730 ATGGAGAAGTACCCGAGAGATCTGCTTCAGAGATTCCTGGTTTCAAGTGGTGGCAGTGATGATATTGAAAACACAACACATACACGGACACGGCAACCCCAAAACTCACAGCATCGTCATCAACTTCATCATCATCAAGAACATGAAGAAGAAGAAGATGAAGGGGTTGAACTGAACCTTGGTCTCTCGTTAGGTGGTAGATTTGGTGTGGACAAGCATGCTAAGAACAAGCTCGTGCGCTCCTCCTCTATTGTGGGAACAGTGCCTCTTTTCCGGGAAGAGGCCTCCGGCCCGGATCCGCCGGCGCCGGGGTACCAGGCGCTTGTGAGATCGTCGTCTTTGCCGACGGAGACGGAGGAGGAGTGGCGGAAGCGGAAGGAGTTGCAGATGCTGCGGCGGATGGAGGCTAAGAGGAGAAGGTCGGAGAAGCAAAGAGTTTCCAAGTCGGAGAGAGACGCCGCTGGCGGAGGAGGAGGTGGTGGTGGTGGTTCGGAGGAACTCGAGGGTGCGGGTGCAACAATGGGGTTGAATAGGTTTGGTTCTTCAACTGTGGGGTCACCAACTTTTGGGTTGCCTAATTGGGCTGGGGGGGCAAGACAAGTTGTTCTTGGTGATGTGCTGGGAAAAGAGAACATTGGGGGGGTTGGTTTTCAAGGATTGTTTGCACAACCATCTTCTCAGGGTTCAGTGGATTCCCAAGGGGGAAGTTCCTCATCAGTTTCTGAAATGGATAGCAAGCCTTTTCTAGGATCAAGCAGTGGTGGTGAAGCAAGAAGCCCAGCTAGTAATCAGTCCTTACAAGAAAGAAGCAGTCAAGAAGCTGTGGGTTCACAAGGGGCAAAGACAAATGAGAATATGAGTAGAACTTCCAGGGCTGAGGTGGAGAATCCATCTAAGAGACCACATCCTGCCCAAAACATGGGGAGGGAAATTGGGACAAACTCAATGGAAGACATGCCTTGTGTATTCACAAAAGGGGATGGACCTAATGGAAGAAGAGTTGAGGGAATCTTATACAAATATGGTAAAAGGGAGGAAGTGAGGATAATGTGTGTGTGCCATGGTAACTTTCTCAGTCCAGCTGAGTTTGTTAAGCATGCTGGTGGTGGGGATGTTGCACACCCTCTTAGGCACATTGTTGTAAACCCTTCTGGTGCTCCCTTTTTGTGA 1170 0.5026 MEKYPRDLLQRFLVSSGGSDDIENTTHTRTRQPQNSQHRHQLHHHQEHEEEEDEGVELNLGLSLGGRFGVDKHAKNKLVRSSSIVGTVPLFREEASGPDPPAPGYQALVRSSSLPTETEEEWRKRKELQMLRRMEAKRRRSEKQRVSKSERDAAGGGGGGGGGSEELEGAGATMGLNRFGSSTVGSPTFGLPNWAGGARQVVLGDVLGKENIGGVGFQGLFAQPSSQGSVDSQGGSSSSVSEMDSKPFLGSSSGGEARSPASNQSLQERSSQEAVGSQGAKTNENMSRTSRAEVENPSKRPHPAQNMGREIGTNSMEDMPCVFTKGDGPNGRRVEGILYKYGKREEVRIMCVCHGNFLSPAEFVKHAGGGDVAHPLRHIVVNPSGAPFL* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00730 389 MobiDBLite consensus disorder prediction 224 314 - -
Rops1g00730 389 MobiDBLite consensus disorder prediction 15 56 - -
Rops1g00730 389 Pfam Putative nuclear localisation signal 108 245 IPR032310 -
Rops1g00730 389 Pfam Tify domain binding domain 347 381 IPR032308 -
Rops1g00730 389 Coils Coil 124 151 - -
Rops1g00730 389 MobiDBLite consensus disorder prediction 17 32 - -
Rops1g00730 389 MobiDBLite consensus disorder prediction 255 292 - -
Rops1g00730 389 MobiDBLite consensus disorder prediction 224 248 - -
Rops1g00730 389 PANTHER AFP HOMOLOG 2 4 384 IPR031307 GO:0007165
Rops1g00730 389 Pfam Ethylene-responsive binding factor-associated repression 51 86 IPR012463 -
Rops1g00730 389 MobiDBLite consensus disorder prediction 116 150 - -
Rops1g00730 389 MobiDBLite consensus disorder prediction 92 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00730 Rops-Chr1 18461524 18467416 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g00730 1 18461524 18467416 Rops1g00730 1 18461524 18467416 ECH