Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00689 ATGGCTTTTATTTCGGAGGTCAACATGAGCTTCTCTCACTACATGGATGATGAATATGCAAAACTCTTCCGGAGAATGAACCCTCCCAGGGTTGTAATTGATAATGAATCCTGCAAGAATGCCACTGTTATAAGGGTTGACAGTGCAAACAAACATGGAATACTTCTTGAAGTTGTACAAATCCTAACTGATCTAAACCTCATTATAACTAAGGCTTACATATCTTCTGATGGTGGATGGTTCATGGATGTTTTTAATGTCACTGGCCAAGATGGAAACAAGGTTACAGATGAAGCCATTTTGGATTACATTAGAAAGTCTCTTGGTCCTGAATCTTGTGTTACATCTCCAATGAGATCTGTTGGGGTTAAGCAAACAATGGATCACACTGCAATAGAGCTTATGGGAAGTGATAGGCCAGGACTGCTTTCAGAAGTGAGTGCTGTTCTAACCAACCTCAAGTGCAATATCCTGAATGCAGAGGTGTGGACTCACAACACTCGTGCAGCAGCTGTAATGCATGTGAATGATGAAGAAACCGGGTCTGCTATTACTGACCCACAAAGGCTTTCTCTAATTAAGGAGCTTCTATGCAATGTGCTTGGTGGTGGTAATAGGAAGAGGGGGGCCAAGACTGTTGTCACTGATGAAGTCACTACTCATACTGAGAGAAGGCTTCACCAGATGATGTTTGCTGATAGGGATTATGAACGTGTCGATGATGATGACTTGGATGAGAAGCAAAGACCAAATGTGAATGTAGTGAATTGGTCTGACAAGGATTATTCTGTAGTAACTATCCAATGTAAGGACAGGCCAAAGCTTCTCTTCGACACGGTTTGTACTTTGACAGACATGGAGTATGTGGTTTTTCATGCAAATATTGATGCTGAGGGGCCACAAGCTTATCAGGAATATTACATCAAGCATATAGATGGGTCCCCTGTAAAATCAGATGCAGAAAGACAACGAGTGATACAATGTCTTGAAGCTGCAATTGAGAGAAGAGTTTCTGAGGGCTTGAAGCTAGAACTCTGCACCACCGACAGAGTTGGACTATTATCTGATGTCACAAGAATCTTCAGAGAGAACAGCCTCACAGTTACCAGGGCAGAAGTTTCCACCAAAGGAGGCAAAGCTGTTAACACCTTCTATGTTCGTGGAGCTTCTGGTTGCATTGTTGATTCCAAGACCATAGAATCCATTAGGCAAACAATTGGCAACACCATACTCAAAGTAAAGGGTAGCCCTGATGAGTTAAAATCTGTTCCTCAAGACTCTCCTACAAGATCTCTCTTCAGTGGCCTTTTCAAGTCAAGATCATTTGTTAACTTTGGCTTGGTTAAGTCTTATTCTTAA 1359 0.4187 MAFISEVNMSFSHYMDDEYAKLFRRMNPPRVVIDNESCKNATVIRVDSANKHGILLEVVQILTDLNLIITKAYISSDGGWFMDVFNVTGQDGNKVTDEAILDYIRKSLGPESCVTSPMRSVGVKQTMDHTAIELMGSDRPGLLSEVSAVLTNLKCNILNAEVWTHNTRAAAVMHVNDEETGSAITDPQRLSLIKELLCNVLGGGNRKRGAKTVVTDEVTTHTERRLHQMMFADRDYERVDDDDLDEKQRPNVNVVNWSDKDYSVVTIQCKDRPKLLFDTVCTLTDMEYVVFHANIDAEGPQAYQEYYIKHIDGSPVKSDAERQRVIQCLEAAIERRVSEGLKLELCTTDRVGLLSDVTRIFRENSLTVTRAEVSTKGGKAVNTFYVRGASGCIVDSKTIESIRQTIGNTILKVKGSPDELKSVPQDSPTRSLFSGLFKSRSFVNFGLVKSYS* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00689 452 ProSiteProfiles ACT domain profile. 131 218 IPR002912 -
Rops1g00689 452 CDD ACT_ACR_3 262 336 - -
Rops1g00689 452 ProSiteProfiles ACT domain profile. 43 122 IPR002912 -
Rops1g00689 452 Gene3D - 341 415 - -
Rops1g00689 452 ProSiteProfiles ACT domain profile. 342 418 IPR002912 -
Rops1g00689 452 CDD ACT_ACR_1 41 111 - -
Rops1g00689 452 SUPERFAMILY ACT-like 338 407 IPR045865 -
Rops1g00689 452 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 14 415 IPR040217 -
Rops1g00689 452 CDD ACT_ACR_2 130 203 - -
Rops1g00689 452 Gene3D - 126 198 - -
Rops1g00689 452 SUPERFAMILY ACT-like 126 197 IPR045865 -
Rops1g00689 452 SUPERFAMILY ACT-like 38 106 IPR045865 -
Rops1g00689 452 Pfam ACT domain 42 102 IPR002912 -
Rops1g00689 452 Pfam ACT domain 132 183 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00689 Rops-Chr1 17372921 17377030 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g00689 1 17372921 17377030 Rops1g00689 1 17372921 17377030 ECH