Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00568 ATGCACAACACATATTTTAGCTCAACGATATATGCTGTTAGGTGTAAAGAATCATTCTCTTTATCTTTCAATGGCCACTCAAACTTCTGGTGTGAAAGATTTGACAGAACCCCATCACACTGTTCATCATGCTGTGGTTATTGTGATTGCTGTGCACTCTGCACTTACAGAGTACCCATAAAGCCTAGTCTTCTAAATGGGCTGAGGCAGTCCACTCTCCTTCAATTGTCAGCAACTAGAAGGTTGATTTTGGGTGTTGAAGACATGTACTTTTCCCGGATACCAACTTATGGTCTTCTCAGAGGTTGTAATGAACTTAATTGTTCTGCCAATGAGAGAACTGCTTGCGATAGAAGTAGAAGAAGCATAAAAGGAAGATGTTTTTGTGCTGCCTCGCAAAAAAGGAGAGAAAATTTTCATTCATTTGGTTCTGATGATTCTGAAGCAGTTCTCAGCATTTTGTGTGAGGAAGTAGATAAAGATGCTACTGGTATTAAATGGAAGAATGCGTCTTCATCCAAAAGAAAGGAAGCTGAGAAGAAAAGAAAAAATGTGAGTAGAGAGAGACATTTGAGTTTGAGTGAGAAAGTAGAAAAAGAGAGAAAAGGAAATTTAAAGCAACATGAGACATCTGCCATAGAATTGAGAAGAAAGCATGAAAAACCCAACAAAGAAAGGGAAGCCTTTATTAAAAGTGAAAACCATAGGAAGCAAAGAGATGTGTCTAGTGGTTCATCTTATTACTCACTTTCATCAGGAGATTTTGAGAGTGACCTGGAAGTTCAGCAAAAGATTAGTTTGGAAGAATTGTCACTGGGATATGAGAAGGATGAAGCAAATCAGATGGAGGGAAATGTAAAGGAAGAATTCAACAGGCAAAGAGATGACTCGAAGAAGGCGCAGGATATTTCAAATAAGGAAAGAATTGCATTTGGTGCGGATATTGATTGGAACTTAAGGAAGAAGTCTGAAAAAAGGCTGACTGAGGAAACTATGCAAGAAACAGAATCCATAAGAGAGCACCATGATATGCATTCAAGACCATATGGAAAAGCATCTATGTCACATAAACGAATCATTAGTGAGGAAGATAATTCATCTTTTGCTGAGCATTTGGATAAGAAAACAAACAAGGCTTCTATTCAAACAGGAAACAGAAGAAAGCATCAATCTACAGATATACAAGAGTCTGGTTGTGATGTAGTTGAGACAACTTTGTCATTGCGAAAGACATTCAGTGGCAGGGAAGGGAACCTAGAAATATCAGAAACACTGTTAAAGGATAAAAGTGATGAACATAAAAAAGTTTTTGGTTCAACTTCTACAACAGGAAAGGAAACTTTGAAATCAAAGAAGACATTTAGCGGCAAGGAAGGGAACCTTGAGATATCAGAAACACTTTTACAAGAAACAAGTGATGAACATAAAAAAATTATTGGTTCTACTTCTACCACAGAAAAGGATGTAATAAATAGAAGTTCCCAGAAATATATGGGAAATTTAAGAATTGATGACACTGAAAGGACCTCAAATACTAGGATAAAGAATGTGGGAGGGAAAAAAATTTCAGTTTTGAGTTCTGTTCAGGGAGTGGAGGAGCAACACCAAAAAGGAGAGAAGATCATTACACAGGCCAAAGAGAGAAGAAGAAATTCTCAACAATTTTCTGAAGGATCACAAGCTCAAAGGAGTAACGTGGAAGATATATCTATCTTGAAGTCTAGAACTAATGTAAAGAACTGGGAAGAAAGGTTAAGCTCAGATGCAAGTGGTACATGGCTCCAAACTGATAAAAGGACGAATCATAGTTTTCAACATAGCAAAGGATCTGAACATGTCAGCACTTCATTGGAAGGCTATGCCAATGATGAAAAGCAAGTTTCAAGTTCTCAAAGAACTTCTGAGAAGGTGAGATTCATCCCAGAAAGTAAATTGGCACCTGTTGTTAAAACTAGAGGAAGTTCTTTCCAAACTGATGAAAGGATTTTTGAATTGGCCAGTGAGGACCAAAGACCTAGGAACGTCTCAAGAGAGGAATCCAGCTTCCAGGGATCATCGAGTTTGGTTTCTGAGGCTGGAAAACGTGTTATATTAGCGAAAGGTGATGAAAGGAGTTCTGCAGTAATGTCGATCCCTTCCTCTTCCCAAATGGGTAGAGGTTCAGCACATGTTGAACTCACTTCTGGAATTGCAAGCCCTGAGATCTTCCTTGAAACTTCAGAAAGTGGCTCATCTGCTTTGTATGACAATTCAGGAAGAAGTCCTACTTTGCTTTCAGGACGATATTCCAGATATGAAAGTGATGAGGCACGCAGTGAGCCTTCTAATATCATGGCTCCAGAAGATGCTCTTGGTTCAGCTGGTCGTTTAGAGGAATCATCTGAACAGTTTGTTGATGAGTTCGTAGAGAGGGCCAGGCATGAAGTCACAACTTCTGAAACACAAGAGATGGAAGTTATTGGAACAAGATTGGCTGTTGATGATGAGGGTAATCCGATCCACAGTTCAAGGCATCAAGGCACTCGAAATGACTCTCAATCAAAGAAGCATGATTCTAGCTGTTCCTCTGGGTTTCATGGTACTAAAGGACCTTCTGACGAAATGTGGGATGTAACTGAACCATCTGTTGAGCAAGGTCTAGTAGCTGAAGAACCAGAGATCAAAGACGAAACTGCGAAACCAATTGTCAATAGAACTGGCGGGTCCCTGTGGAGTATGATTGCTGATGTTGTTCGATTACGCTGGGGTTTCCGTTCTGGTTCCTCCACTTCAGCTGGAAGATCAGGTGAGAGAAACTCATCAAACAAATCTGATAGTGAGACATGGTTTTCTGGGCAGGAGCATGAGGAAACCAGTAAAAGTAATGTAATGAAAGAAACAAGTGTGCTACCACAAGCCACTTCTGATAAGTTAAAACCAGGTAATCGATATGACCAAAGTGAGGGAGTGGTGTCTGGCCCTAAAAAATTGAAGGATAAAGGAAAACATGTTGAAGTTGGACCATCTTCTCCAAATACACTGGAAAGTGGATCAACATCAGTAGGTGCCTCATATGCTTCTGGAGAGGAAAATGCTAGTTGGACTGAAGATGGAAAAGATTTGAAAGTCACTACTTCTGGCATAAAAAACATGGAATTACCAATTCCATTACCTGCCAGAGGGCATCCTATTGTAGGAGAAATTGTAAATATTAGTGGATCTGACATGTCTGGAATTGAACCAGTGATGCCAGTCAAGGAACCTATTGCTCCAGTGCAGTCTGAATTGTCTGGCTCGGAGAGAAAGGATGGAGAGTTGAAGCAAAGGAAGTTTCAGCGGAACAGGCAAGTCTTGAGAGATAGGTTTGATGAATGGGAAGAAGCCTATAAACTTGAACTTGAGCAGCGAAGAATGGATGAAATGTTCATGAAAGAAGCACTTTTGGAAGCCAGGAAGGCTGCTGATATTTGGGAGGTCCCTGTTGGTGCTGTTCTTGTGCAGCATGGGAAGATTATTGCACGAGGATGCAACTTGGTAGAAGAGTTACGGGACTCCACTGCCCATGCAGAGATGATTTGTATACGAGAAGCTTCAAAACTTCTTCACAGTTGGAGACTATCAGAAACTACACTTTATGTAACGCTTGAGCCCTGTCCGATGTGTGCTGGCGCCATTCTTCAGGCGAGAGTAGATACTGTTGTATGGGGAGCTCCTAATAAACTTCTTGGAGCTGATGGTAGCTGGATTAGGCTTTTCCCTGATGGAGGAGAAAATGCCTCAGAAGCAAGAGACATGCCACCTGCCCCAGTTCACCCTTTCCATCCAAACATGAAAATAAGAAGAGGGGTCTTGGCAACTGAGTGTGCAGATGTAATGCAGCAGTTCTTTCAGCTGAGAAGGAAAAAGAAGAAAGAAGAGCCACAAAAGGACCCCTCTCGCCTTTCTGTTACTCACCACCATCCCTCCAAGTTACTTAACAAGATGCATGACATCTTCCACGTCATGTTCTGTTTGTAA 3996 0.4084 MHNTYFSSTIYAVRCKESFSLSFNGHSNFWCERFDRTPSHCSSCCGYCDCCALCTYRVPIKPSLLNGLRQSTLLQLSATRRLILGVEDMYFSRIPTYGLLRGCNELNCSANERTACDRSRRSIKGRCFCAASQKRRENFHSFGSDDSEAVLSILCEEVDKDATGIKWKNASSSKRKEAEKKRKNVSRERHLSLSEKVEKERKGNLKQHETSAIELRRKHEKPNKEREAFIKSENHRKQRDVSSGSSYYSLSSGDFESDLEVQQKISLEELSLGYEKDEANQMEGNVKEEFNRQRDDSKKAQDISNKERIAFGADIDWNLRKKSEKRLTEETMQETESIREHHDMHSRPYGKASMSHKRIISEEDNSSFAEHLDKKTNKASIQTGNRRKHQSTDIQESGCDVVETTLSLRKTFSGREGNLEISETLLKDKSDEHKKVFGSTSTTGKETLKSKKTFSGKEGNLEISETLLQETSDEHKKIIGSTSTTEKDVINRSSQKYMGNLRIDDTERTSNTRIKNVGGKKISVLSSVQGVEEQHQKGEKIITQAKERRRNSQQFSEGSQAQRSNVEDISILKSRTNVKNWEERLSSDASGTWLQTDKRTNHSFQHSKGSEHVSTSLEGYANDEKQVSSSQRTSEKVRFIPESKLAPVVKTRGSSFQTDERIFELASEDQRPRNVSREESSFQGSSSLVSEAGKRVILAKGDERSSAVMSIPSSSQMGRGSAHVELTSGIASPEIFLETSESGSSALYDNSGRSPTLLSGRYSRYESDEARSEPSNIMAPEDALGSAGRLEESSEQFVDEFVERARHEVTTSETQEMEVIGTRLAVDDEGNPIHSSRHQGTRNDSQSKKHDSSCSSGFHGTKGPSDEMWDVTEPSVEQGLVAEEPEIKDETAKPIVNRTGGSLWSMIADVVRLRWGFRSGSSTSAGRSGERNSSNKSDSETWFSGQEHEETSKSNVMKETSVLPQATSDKLKPGNRYDQSEGVVSGPKKLKDKGKHVEVGPSSPNTLESGSTSVGASYASGEENASWTEDGKDLKVTTSGIKNMELPIPLPARGHPIVGEIVNISGSDMSGIEPVMPVKEPIAPVQSELSGSERKDGELKQRKFQRNRQVLRDRFDEWEEAYKLELEQRRMDEMFMKEALLEARKAADIWEVPVGAVLVQHGKIIARGCNLVEELRDSTAHAEMICIREASKLLHSWRLSETTLYVTLEPCPMCAGAILQARVDTVVWGAPNKLLGADGSWIRLFPDGGENASEARDMPPAPVHPFHPNMKIRRGVLATECADVMQQFFQLRRKKKKEEPQKDPSRLSVTHHHPSKLLNKMHDIFHVMFCL* 1332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00568 1331 MobiDBLite consensus disorder prediction 919 1032 - -
Rops1g00568 1331 MobiDBLite consensus disorder prediction 533 553 - -
Rops1g00568 1331 MobiDBLite consensus disorder prediction 169 247 - -
Rops1g00568 1331 MobiDBLite consensus disorder prediction 668 688 - -
Rops1g00568 1331 MobiDBLite consensus disorder prediction 701 724 - -
Rops1g00568 1331 CDD nucleoside_deaminase 1136 1243 - -
Rops1g00568 1331 SUPERFAMILY Cytidine deaminase-like 1124 1297 IPR016193 GO:0003824
Rops1g00568 1331 Coils Coil 168 188 - -
Rops1g00568 1331 MobiDBLite consensus disorder prediction 169 240 - -
Rops1g00568 1331 MobiDBLite consensus disorder prediction 583 600 - -
Rops1g00568 1331 Gene3D Cytidine Deaminase, domain 2 1120 1307 - -
Rops1g00568 1331 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 1130 1252 IPR002125 -
Rops1g00568 1331 MobiDBLite consensus disorder prediction 583 635 - -
Rops1g00568 1331 MobiDBLite consensus disorder prediction 326 396 - -
Rops1g00568 1331 MobiDBLite consensus disorder prediction 919 941 - -
Rops1g00568 1331 MobiDBLite consensus disorder prediction 823 870 - -
Rops1g00568 1331 FunFam tRNA-specific adenosine deaminase 1125 1304 - -
Rops1g00568 1331 Hamap tRNA-specific adenosine deaminase [tadA]. 1136 1293 IPR028883 GO:0002100|GO:0008251
Rops1g00568 1331 MobiDBLite consensus disorder prediction 1292 1313 - -
Rops1g00568 1331 MobiDBLite consensus disorder prediction 707 722 - -
Rops1g00568 1331 MobiDBLite consensus disorder prediction 607 635 - -
Rops1g00568 1331 MobiDBLite consensus disorder prediction 529 568 - -
Rops1g00568 1331 MobiDBLite consensus disorder prediction 764 792 - -
Rops1g00568 1331 PANTHER CYTOSINE DEAMINASE FAMILY MEMBER 1104 1297 - -
Rops1g00568 1331 MobiDBLite consensus disorder prediction 1002 1024 - -
Rops1g00568 1331 MobiDBLite consensus disorder prediction 830 849 - -
Rops1g00568 1331 MobiDBLite consensus disorder prediction 554 568 - -
Rops1g00568 1331 Pfam MafB19-like deaminase 1133 1232 IPR028883 GO:0002100|GO:0008251
Rops1g00568 1331 MobiDBLite consensus disorder prediction 326 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00568 Rops-Chr1 14333312 14341754 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g00568 1 14333312 14341754 Rops1g00568 1 14333312 14341754 ECH