Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00564 ATGGTGAAGTTCTCAAAGCAGTTTGAGGGGCAACTCATTCCAGAATGGAAAGAAGCTTTTGTAGATTACTGGCAACTCAAGAAGGACCTCAAAAAAGTCCAACTCCTTAATATTACCAATACCACCAATACACCCAACAGTAGTTCTGTACCTAAGTACATCATCTCATCACTAAGAAATTATTCTTTATTCGGTCATCAACATGTAGAGCATGGACCAATTCAAGTCCATAGGAAACTTGCTTCATCATCTTTTGTGGGGGACATGTATGAGACTGAACTGCTAGAGCAATTTGCTGACACTGATGCTACTAAAGAATTTTTTGCATGTCTGGACCAGCAACTTAACAAGGTCAATAATTTTTATAGAACAAAGGAGAAAGAGTTCATGGAGAGAGGGGATTCTTTGAAAAAGCAAATGGACATTCTCCTTAAGCTCAAATCTACATTCGAGGAGCAGCGAGGCAAAGGAGGCTCTTCTCATGACTCCAAGGAGGACCAATCTATTTCTTGCACATTCTCTAATGAGGAGGACTCTGTAAGGAACAGAGCACTGCAAGAAGAAATGCAGGACACTGGCACAGATGATTTGGAGAAAAATGAAGTACCATTTTCAGATTCCCCTCGTGCAGATGAAAATGGGAACTCTATGCAGATGAAAAGAGAAGATGGAAAATTGAGAACACTTTCTGGCCATATTATCAATTGCCAAGGGAAGAATCTGAAGATAAACATTCCATTGACAACACCATCCCGAACCTTCTCAGCTATAAGTTACCTTCTTAGAGAAGATTTGCTTAACCAGTCTTCAAGGAAATGTGGTCCAGAAGGTGGAAAAATTCACCTTAGCAAAACAAAGTTGCATCATGCTGAAAAGATGATCAAAGGAGGCTTCATTGAACTCTACAAAGGACTAGGATATCTCAAAGTTTACAGGAACTTGAATATGCTAGCATTTATAAAGATTCTGAAGAAGTTTGACAAGGTCACTGCAAAACAAATTCTTCCCATCTATCTCAAAGTAGTTGAGAGCTCCTATTTCAATAGCTCAGACAAGGTGATGAAGTTAGCTGATGAAGTTGAGGAACTATTTATAAAAAATTTTGCTGAAGATAATCGAAGGAAGGCCATGAAATACCTTAGGCCAAGCCAACGTGAAGAATCACATGCTGTAACTTTCTTCATTGGACTATTTACTGGATGCTTCTTGGCACTTTTTGTGGGATATGTTATAATGGCTCATGTGACTGGCCTGTACAGAAGACAATCAAATTCAGTTTATATGGAAACTGTCTACCCTGTGCTTAGCATGTTCAGCCTTGTGTTTCTACATTTCTTTCTTTATGGGTGCAACATTCTTGCATGGAGAAAGACTCGTATAAATTACAGCTTCATTTTTGAGCTGGCCCCTACCAAAGAACTTAAGTACAGAGATATATTCTTAATTTGTACAATGGCTATGACTGCTATTGTTGGGATAATGTTTCTTCATTTGACTCTACTGACAAAAGGGTATTCTTATGCTCAAGTTCAAGACATTCCAGGATTTCTTCTTCTGGTTTTCTTATTAATAATATTCTGCCCCTTCAACATTATATACCGGTCAAGCCGTTACCGTTTCCTTTGTGTGATAAGGAACATAATTTTGTCACCCCTTTACAAGGTTGTCATGCTGGACTTTTTCATGGCTGATCAACTTTGTAGTCAGGTGCCAATGCTCAGGAACCTTGAGTATGTGGCATGTTATTACATAACTGGGAGCTACAAAACTCAGGACTATGGGTACTGCATGAGGGCAAAGCATTACAGAGACCTAGCTTATGCAGTGTCATTTCTACCCTATTATTGGAGGGCTATGCAGTGTGCAAGAAGATGGTTTGATGAAGGGCAAACAAGCCACCTAGTAAATCTAGGCAAATATGTATCAGCAATGTTAGCAGCAGGTGCTAAAGTGGCTTATGAGAAAGATGAAAGTGTTATATGGCTTTGTCTTGTTGTGATCATGTCAAGTGCAGCAACTGTGTACCAATTGTACTGGGACTTTGTAAAAGACTGGGGTTTGCTTCAAATGAATTCCAAGAATCCATGGCTAAGGAATGAATTAATGCTTCGAAGAAAAGCCATTTACTACTTCTCAATGGGATTAAATCTTATTCTGAGGCTTGCTTGGTTGCAAACTGTCCTCCATTCAAGTTTTGAAAACGTTGATTATCGAGTAACAAGCTTTTTATTAGCAGCTCTTGAAGTTATTAGAAGAGGGCTATGGAATTTCTACAGATTGGAGAATGAGCATCTAACTAATGCTGGCAAGTTTAGAGCAGTGAAGATAGTACCACTTCCTTTTCATGAAGTGGATGAGGAAGACTAG 2367 0.3904 MVKFSKQFEGQLIPEWKEAFVDYWQLKKDLKKVQLLNITNTTNTPNSSSVPKYIISSLRNYSLFGHQHVEHGPIQVHRKLASSSFVGDMYETELLEQFADTDATKEFFACLDQQLNKVNNFYRTKEKEFMERGDSLKKQMDILLKLKSTFEEQRGKGGSSHDSKEDQSISCTFSNEEDSVRNRALQEEMQDTGTDDLEKNEVPFSDSPRADENGNSMQMKREDGKLRTLSGHIINCQGKNLKINIPLTTPSRTFSAISYLLREDLLNQSSRKCGPEGGKIHLSKTKLHHAEKMIKGGFIELYKGLGYLKVYRNLNMLAFIKILKKFDKVTAKQILPIYLKVVESSYFNSSDKVMKLADEVEELFIKNFAEDNRRKAMKYLRPSQREESHAVTFFIGLFTGCFLALFVGYVIMAHVTGLYRRQSNSVYMETVYPVLSMFSLVFLHFFLYGCNILAWRKTRINYSFIFELAPTKELKYRDIFLICTMAMTAIVGIMFLHLTLLTKGYSYAQVQDIPGFLLLVFLLIIFCPFNIIYRSSRYRFLCVIRNIILSPLYKVVMLDFFMADQLCSQVPMLRNLEYVACYYITGSYKTQDYGYCMRAKHYRDLAYAVSFLPYYWRAMQCARRWFDEGQTSHLVNLGKYVSAMLAAGAKVAYEKDESVIWLCLVVIMSSAATVYQLYWDFVKDWGLLQMNSKNPWLRNELMLRRKAIYYFSMGLNLILRLAWLQTVLHSSFENVDYRVTSFLLAALEVIRRGLWNFYRLENEHLTNAGKFRAVKIVPLPFHEVDEED* 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00564 788 Pfam EXS family 432 765 IPR004342 GO:0016020
Rops1g00564 788 Pfam SPX domain 2 342 IPR004331 -
Rops1g00564 788 CDD SPX_PHO1_like 3 336 IPR034092 -
Rops1g00564 788 MobiDBLite consensus disorder prediction 151 217 - -
Rops1g00564 788 MobiDBLite consensus disorder prediction 164 179 - -
Rops1g00564 788 MobiDBLite consensus disorder prediction 180 206 - -
Rops1g00564 788 PANTHER XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATED 2 784 - -
Rops1g00564 788 ProSiteProfiles EXS domain profile. 597 788 IPR004342 GO:0016020
Rops1g00564 788 ProSiteProfiles SPX domain profile. 2 340 IPR004331 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00564 Rops-Chr1 14319030 14325011 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g00564 1 14319030 14325011 Rops1g00564 1 14319030 14325011 ECH