Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00515 ATGGAATTTTCTTGCAAGCACTTCAAGGTGGGGAAATGTGAAGGAGAGAAAATAGTAGATGGGGAAACCATGCCCTTAGTGCTACAACCTCCAGAACCAAATAAAAGTGACTTGGAATCCTTGCTCTTGGATTTGAAGAACAACAAAGAGTGGTTTGAGCAAATGATCATAAAGAACAGTGCTGTTCTCCTTAGAGGTTTTGATGTCAAGAATGCTGAGGACTTCAATGAAATCATTGAAACCTTTGGATGGGAAGACATTCGCTATGTTGGACCAGCACCTCGTACACATATTTACAAAAGGGTGTGGACTGCCAATGAAGGGCCTCTCTCAGAGTTCATATACTATCACCATGAAATGGTTTTGATTAAGGAATATCCCAAGAATTTAATGCTCTTTTGTGAGATACCACCCCCTGAAGGAGGAGAGACCCCTTTTGTTCCAAGCTTCAAAGTGACAGAAAGGATGACGGAGGAGTTCCCAGAAGTGGTGAAGGAGATGGAAGAGAAGGGTTTGAAGTATTCATTTACAGCTCTTAGTAAGGATGATACCTCCTCCATGAGAGGTAGAGGGTGGGAAGATGCCTTTGGGACCTCAGATCGCAATGAAGCTGAGAGAAGGGCAAAAGCTCTAGGAATGGACATGGAGTGGCTTCCAAATGGTGGGGTGAAGACAATACTTGGACCAAGAAGTTTAACCAAGGTATTTGAAGGAAGGAAAGGAAGAAGAATGTGGTTTAACACTATAGTAGGCATGCATGGGAAGGAGCTTAGCTCAGCCATGATGGCAGATGGAACAGAGATTCCAGAGAAGGTAGTGAAAAGGTGTGGAGAGATCATTGAAGAAGAGAGCATACAATTCAAGTGGCAGAAAGGAGATGTTCTCTTCTTTGATAACTATGCTTTGCTTCATGGTAGAAGGCCTTCTCTTCCTCCTAGAAGGGTCCTGGTTGCTACTTGCAAGTGA 966 0.4348 MEFSCKHFKVGKCEGEKIVDGETMPLVLQPPEPNKSDLESLLLDLKNNKEWFEQMIIKNSAVLLRGFDVKNAEDFNEIIETFGWEDIRYVGPAPRTHIYKRVWTANEGPLSEFIYYHHEMVLIKEYPKNLMLFCEIPPPEGGETPFVPSFKVTERMTEEFPEVVKEMEEKGLKYSFTALSKDDTSSMRGRGWEDAFGTSDRNEAERRAKALGMDMEWLPNGGVKTILGPRSLTKVFEGRKGRRMWFNTIVGMHGKELSSAMMADGTEIPEKVVKRCGEIIEEESIQFKWQKGDVLFFDNYALLHGRRPSLPPRRVLVATCK* 322
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00515 321 Gene3D - 4 321 IPR042098 -
Rops1g00515 321 FunFam Clavaminate synthase-like protein At3g21360 5 321 - -
Rops1g00515 321 SUPERFAMILY Clavaminate synthase-like 10 320 - -
Rops1g00515 321 PANTHER GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED 14 320 - -
Rops1g00515 321 Pfam Taurine catabolism dioxygenase TauD, TfdA family 35 317 IPR003819 GO:0016491
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Rops1g00515 Rops-Chr1 13477707 13479983 Dispersed
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g00515 1 13477707 13479983 Rops1g00515 1 13477707 13479983 ECH