Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00514 ATGGCCACTTTCTCTCCCTCACTACTTCATCTTCTCTTCTTTGCAAGAATTTCAGGGCTTGCAGTTGCAGTGCTTGTTCTTTTTTGGGCCCTTAACTTCAAGTCTAGCTTCCTCACTCCCTCTCTTTCCCATCAAGACCTCATCTATGCAGTTCTTCATCCTGTGCTTATGGTCATTGGGTTTATCCTCTTAAGTGGAGAAGCAATTTTGGTGCATAGATGGTTACCTGGGTCAAGGGGCTTGAAGAAATCTGTGCATTTGTGTCTTCAAGGGGTGGCTCTTACTTCTGGGATCTTTGGGATTTGGACTAAATTCCAGGGAAAAGATGGGATTGTGGCAAATTTCTTTAGCCTACATTCATGGATGGGTTTGATTTGTATCTCCCTCTTTGGAGCTCAGTGGTTGATGGGCTTCATGAACTTTTGGCACCGAGGAGAGGTGCGCATAGTGAGGATAAGGATCTTACCTTGGCATGTATTCCTTGGCCTATACACTTATGCTTTGGCAGTAGCAACAGCAGAAACTGGATTGCTAGAGAAATTGACATTTTTACAAACAAATAGAAATGTATCTAAGCACAGCACTGAGTCCATGGTGGTTAATAGTTTAGGCCTGTGTCTTGCCATTCTCAGTGGCTTTGTTATTTTGGCTGCTGTTTCACCTAAGTATCCAACCCTTCAAAGCAAACTTTTGTACTCAGACACAAGGTGTTTGTCATCTTAA 723 0.4302 MATFSPSLLHLLFFARISGLAVAVLVLFWALNFKSSFLTPSLSHQDLIYAVLHPVLMVIGFILLSGEAILVHRWLPGSRGLKKSVHLCLQGVALTSGIFGIWTKFQGKDGIVANFFSLHSWMGLICISLFGAQWLMGFMNFWHRGEVRIVRIRILPWHVFLGLYTYALAVATAETGLLEKLTFLQTNRNVSKHSTESMVVNSLGLCLAILSGFVILAAVSPKYPTLQSKLLYSDTRCLSS* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00514 240 ProSiteProfiles Cytochrome b561 domain profile. 14 219 IPR006593 -
Rops1g00514 240 SMART 561_7 52 177 IPR006593 -
Rops1g00514 240 PANTHER CYTOCHROME B561-RELATED 8 222 IPR043205 GO:0016491
Rops1g00514 240 FunFam Cytochrome b reductase 1 5 228 - -
Rops1g00514 240 Pfam Eukaryotic cytochrome b561 52 183 IPR006593 -
Rops1g00514 240 Gene3D - 5 227 - -
Rops1g00514 240 CDD Cyt_b561_ACYB-1_like 52 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00514 Rops-Chr1 13463624 13468348 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g00514 1 240 Chloroplast and Mitochondria Gene Families AT1G26100 64.082 2.69e-98 285
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g00514 1 13463624 13468348 Rops1g00514 1 13463624 13468348 ECH