Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00500 ATGTCTATCCCTCTTACTATCTCCTTCTCTCTCTTCTTGTTATTCATCAACACCATTTGCACAGCTATCCCTCCTCCCATTGGTCTTTCCTACCACATCGACTGCGGCAGCCCTACCGACAACACCGACTCCTTCAACACCTCTTGGCTCTCCGACCGCTTCTTCACCGGTGGCGCCTCCGGCATAGTCTCAGAGCCCCTCCACTTTCGCCACCAGCACGAGAAGACCCTCCGCTACTTCCCCATCTCCTCCGGCAAGAAGAATTGCTACTCCATCCCCTCCCTCGTTCCTTCCCGCTACCTCATCCGCACCTTCGTCGTCTACGACAACTACGACGGCAAGTCCCACCCTCCTTCCTTCGACGTCTCCGTCCGCGGCACCGTCGTCTTCTCATGGCGCTCCCCCTGGCCTCAGTCCCTCGCCCGTGACGGCGCCTACTCCGACCTCTTCGCGTCCCTCCTCCCCGGCGAAGAAGCCCTAATTTGCTTCTACAGCTTCGCCACTGATCCTCCAGTTGTTTCTTCGCTGGAGCTCTTCGTCGCTGATCCGGCCTCCTACGATGGAATTGACAACAATGAAACTATACTAGTGAACTATGGCAGGTTATCCTGTGGGTCCGACCAGTGGGGTCCGGGATTCTCCAATGACGCTGACCGGTTTGGAAGGTCCTGGCAATCAGACAAGGAATTCCGAACCGGCGGAAATAGGGTGGTTACAGTTTCCACTCGGAACAGCATCAGTGGGACAGATCAGAAACCTAATTATTTCCCAATGAAGCTGTATCAGATGGCGGCGACAACGGCGGAGACAGCGGAAGAGGGTGGTGGAGTGTTGGAGTATGAATTGAGTGTGGATGCGAAGCTGGATTACCTTGTGTGGTTGCATTTCTCGGAGATTGAACAAAGGGTGAGGAAGGCAGGGGGGAGGGTGTTTGATGTGTTCATCAATGGTGATAATTTGACCAGGGTGGATATATACAAGCAAGTGGGAAGTTTTGCTGCGTTTACTTGGCATCATACGGTGAAGAATTTGAGTAGCAGCGTTTTGAGTTTGAAGCTTGTTGGGGTTGTGGGTGCGCCTCTCATTTGTGGGATTGAGAATTATGCTTTGGTCCCTGGTGATCCTTCCACTGTTCCTCAACAAGTGATTGCCATGAAAGCATTGAAAGATTCACTTCGTGTTCCTGAAAGAATGGGTTGGAATGGTGATCCTTGTGCTCCTACTAATTGGGATGCTTGGGAGGGAGTTACCTGCCGAATGAGTAAGGATAGCACTGCTCTTGTGATAAGTCAAATAGATCTGGGCAGTCAAGGCTTGAAAGGGTTCATAAGTGACCAGATTAGTCTTTTGTCAGACTTGGTAAGCCTGAACTTGAGTTCTAATTTGTTGGTGGGTGAAATACCATCTGGACTGGGTCAAAAATCCTTGACACACCTGGACTTGTCCAACAATCAGTTAACAGGCTCCATACCAGATAGTATAGCCTCTTCAAGTTTGCGGCTTGCGCTATTGAATGGTAACTTATTGGAAGGACGAGTACCAGAGGAACTTTATTCGATTGGGGTGCATGGTGGAGCTATTGATCTCTCTAGCAACAAAGCTTTGTGCGGTGTGCCATCTCTGCCAGCTTGTCCTATGTTTTGGGAGAATGGCAGATTATCTACTCCGGGTAAAATTGCAATAGGCTTGGCATGTCTTTTTGTTTTCTGTGTGATACTGCTGCTGGCCTATATGTACATCAGGAGGCGAAGAAATGATTATGACTTTGCTCTGCCTCATGAATTAACATCATTAGCCGCCAAGAGAAACCGATATCAGAGGCAGAAATCCTTAATGGTTCTTGAGATGGAGAGTCAACACGCCAAGGGAGTACCTTCACCTTTTACCTCACAATAG 1896 0.4968 MSIPLTISFSLFLLFINTICTAIPPPIGLSYHIDCGSPTDNTDSFNTSWLSDRFFTGGASGIVSEPLHFRHQHEKTLRYFPISSGKKNCYSIPSLVPSRYLIRTFVVYDNYDGKSHPPSFDVSVRGTVVFSWRSPWPQSLARDGAYSDLFASLLPGEEALICFYSFATDPPVVSSLELFVADPASYDGIDNNETILVNYGRLSCGSDQWGPGFSNDADRFGRSWQSDKEFRTGGNRVVTVSTRNSISGTDQKPNYFPMKLYQMAATTAETAEEGGGVLEYELSVDAKLDYLVWLHFSEIEQRVRKAGGRVFDVFINGDNLTRVDIYKQVGSFAAFTWHHTVKNLSSSVLSLKLVGVVGAPLICGIENYALVPGDPSTVPQQVIAMKALKDSLRVPERMGWNGDPCAPTNWDAWEGVTCRMSKDSTALVISQIDLGSQGLKGFISDQISLLSDLVSLNLSSNLLVGEIPSGLGQKSLTHLDLSNNQLTGSIPDSIASSSLRLALLNGNLLEGRVPEELYSIGVHGGAIDLSSNKALCGVPSLPACPMFWENGRLSTPGKIAIGLACLFVFCVILLLAYMYIRRRRNDYDFALPHELTSLAAKRNRYQRQKSLMVLEMESQHAKGVPSPFTSQ* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00500 631 FunFam Di-glucose binding protein with Leucine-rich repeat domain 201 368 - -
Rops1g00500 631 Pfam Malectin-like domain 33 369 IPR024788 -
Rops1g00500 631 Gene3D Ribonuclease Inhibitor 381 547 IPR032675 -
Rops1g00500 631 PANTHER OS07G0107800 PROTEIN-RELATED 32 600 - -
Rops1g00500 631 FunFam Putative LRR receptor-like serine/threonine-protein kinase 379 545 - -
Rops1g00500 631 Gene3D - 200 369 - -
Rops1g00500 631 SUPERFAMILY L domain-like 377 541 - -
Rops1g00500 631 ProSiteProfiles Leucine-rich repeat profile. 475 497 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00500 Rops-Chr1 13106574 13118277 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g00500 33 507 Receptor kinase-like Gene Family AT5G59670 27.255 7.25e-32 130
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g00500 1 13106574 13118277 Rops1g00500 1 13106574 13118277 ECH