Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00484 ATGGTGTCAACTTCTTCTCCCCCTTCTAAGAAAGTTCAATCAAACCAAAAATGGGTCGACAATGGCCCTTCTCGCAATGCCAAATGGTGGCACTCAACTTTTCACACTGTTACAGCCATGATAGGTGCAGGTGTTCTCAGCCTGCCTTATGCCATGGCATATCTAGGATGGGTTCCTGGGACCTTGATGTTGTTGTTATCTTGGGGCTTGACCTTAAACACAATGTGGCAAATGATCCAACTCCATGAGTGTGTTCCAGGAACACGTTTTGATCGTTATATTGATCTTGGTAGACATGCTTTTGGACCTAAACTTGGACCATGGATTGTGCTGCCACAGCAACTGATTGTCCAAGTTGGGTGTGATATTGTGTACATGGTCACTGGAGGGAAGTGCTTAAAGAAGTTCATGGAGATTGCATGCACCAATTGCACACAACTCAAGCAGTCTTACTGGATTCTGATCTTCGGTGCCATCCATTTCTTTCTGTCTCAGCTTCCCAATTTCGATTCTGTTGCTGGTGTTTCTTTAGCCGCAGCTGTGATGTCATTAAGCTATTCAACTATATCTTGGGTAGCTTGCTTGGCCAGAGGTAGGGTTGACAATGTTAGCTATTCCTACAAGGAAACCAGTACAACTGACTTAATGTTCAGAGTCTTCAATGCACTTGGTCAAATTTCATTTGCATTTGCTGGCCATGCAGTGGCCCTTGAAATTCAGGCTACAATTCCATCAACCCCAGAAAAACCCTCACAAATACCAATGTGGAGAGGTGCTATTGGTGCCTATTTTATCAATGCCATATGCTATTTCCCAGTTGCATTTATAGGATACTGGGCCTTTGGAAGAGATGTGGAGGATAATGTGCTCATGGCACTTGAAAGACCAGCATGGCTCATTGCCTCAGCTAACTTGATGGTTTTCATTCATGTTATTGGTAGCTACCAGGTTTATGCTATGCCTGTTTTCGACTTGATTGAGAGGATGATGATCAAAAGACTGAACTTCCCTCCAGGACTAGCACTTAGACTTGTTGCTAGATCCTCTTTTGTAGCTTTTACACTGTTCATTGGGGTTACATTCCCTTTCTTTGGTGATCTTCTTGGGTTCTTTGGTGGATTTGGTTTTGCCCCCACTTCATATTTTCTTCCTAGTATAATGTGGCTGATAATCAAGAAGCCAAAGAGATTTAGCATCAACTGGTGGATCAATTGGGCTGCAATATACATTGGAGTTGGCATAATGTTGGCATCCACGGTTGGTGGCTTGAGGAATATTGCTGCTGATGCATCAACTTATAGTTTCTATACCTAA 1314 0.4307 MVSTSSPPSKKVQSNQKWVDNGPSRNAKWWHSTFHTVTAMIGAGVLSLPYAMAYLGWVPGTLMLLLSWGLTLNTMWQMIQLHECVPGTRFDRYIDLGRHAFGPKLGPWIVLPQQLIVQVGCDIVYMVTGGKCLKKFMEIACTNCTQLKQSYWILIFGAIHFFLSQLPNFDSVAGVSLAAAVMSLSYSTISWVACLARGRVDNVSYSYKETSTTDLMFRVFNALGQISFAFAGHAVALEIQATIPSTPEKPSQIPMWRGAIGAYFINAICYFPVAFIGYWAFGRDVEDNVLMALERPAWLIASANLMVFIHVIGSYQVYAMPVFDLIERMMIKRLNFPPGLALRLVARSSFVAFTLFIGVTFPFFGDLLGFFGGFGFAPTSYFLPSIMWLIIKKPKRFSINWWINWAAIYIGVGIMLASTVGGLRNIAADASTYSFYT* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00484 437 MobiDBLite consensus disorder prediction 1 20 - -
Rops1g00484 437 PANTHER OS05G0424000 PROTEIN-RELATED 27 422 - -
Rops1g00484 437 FunFam Lysine histidine transporter 1 22 432 - -
Rops1g00484 437 Pfam Transmembrane amino acid transporter protein 26 421 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00484 Rops-Chr1 12482271 12484884 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g00484 13 436 Organic Solute Cotransporters AT1G25530 77.123 0.0 662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g00484 1 12482271 12484884 Rops1g00484 1 12482271 12484884 ECH