Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00481 ATGAAGAGTGGGATTTGTGGGAGAATTAGTCTCTCTCCCAACCATGTCTTCAGACCAGGGGACAGATATTCTTTTTGTAAGGGACCATGCTCCAATCTTTGCGTTCCCATGGCTGTTTTAGGGACAGGACCTGGTAAAGGGGGAGGGCTGCTGGAAAAGCCAGTTATCGAGAAAGTCACCCCTGGCCGTGAATCTGAATTTGATTTGAAGAAATCACGGAAAACAGCGCCGCCATATCGTGTAATATTGCACAATGACAACTACAATAAACGGGAGTATGTTGTCCAAGTACTGATGAAGGTCATCCCTGGAATGACTCTTGATAATGCAGTCAACATCATGCAAGAAGCTCACTACAATGGATTGTCAGTGGTCATCATCTGTGCCCAAGCTGATGCTGAAGATCATTGCATGCAACTAAGAGGCAATGGGTTACTCAGTTCAATTGAACCTGCAAGTGGTGGTTGCTGA 471 0.4565 MKSGICGRISLSPNHVFRPGDRYSFCKGPCSNLCVPMAVLGTGPGKGGGLLEKPVIEKVTPGRESEFDLKKSRKTAPPYRVILHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGLSVVIICAQADAEDHCMQLRGNGLLSSIEPASGGC* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00481 156 Gene3D - 73 151 IPR014719 -
Rops1g00481 156 PANTHER ATP-DEPENDENT CLP PROTEASE ADAPTER PROTEIN CLPS1, CHLOROPLASTIC 29 156 IPR022935 GO:0006508
Rops1g00481 156 Hamap ATP-dependent Clp protease adapter protein ClpS [clpS]. 64 153 IPR022935 GO:0006508
Rops1g00481 156 FunFam ATP-dependent Clp protease adapter protein CLPS1, chloroplastic 73 151 - -
Rops1g00481 156 Pfam ATP-dependent Clp protease adaptor protein ClpS 75 142 IPR003769 GO:0030163
Rops1g00481 156 SUPERFAMILY ClpS-like 73 151 IPR014719 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00481 Rops-Chr1 12417982 12421583 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g00481 1 12417982 12421583 Rops1g00481 1 12417982 12421583 ECH