Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03852 ATGGTGGTGATCAATGAAGTAATCGATCCCTATGCACAAGAAGAAACTGAAACTGAAGCTGAAGCTGAAGGTATGGACTATGACCAGCTCAAGAAGCGCATGTGTAAGGATAGGATCCTTCTGCAGAAGCTCAAGGAAAAACGTGACAAAGATGAGCCAGAGCAACATGCAAAACAAGAGGCATCAAGAAGGAAAAAGATGTCAAGAGCACAAGATTCTGTCCTCAAGTATATGGTGAAGATTATGGAGGTTTGCAATGCTCAAGGTTTTGTATATGGGATTATCCCAGAAAAGGGTAAGCCAATATCTGGTTCCTCTGATAGCTTACGTGAGTGGTGGAAAGATCAAATCAGATTTGATCAAAATGCTCCCACTGCCATAGCCAATTACTTGCCACTTCTTGAAAAAGATGAGGTGGATCCAACTTCCTTCGTACATCTCCTTCAAGACTTGCAGGATTCTACCCTTGGTTCTATCCTTTCTGCTCTCATGCAACACTGTGTCCCTCCACAAAGAAGGTTCCCTTTAGAGAGGGGAATATCACCCCCTTGGTGGCCAAAAGGGAAGGAACTTTGGTGGGGTGAGCAAGGACTATTGGCTCAAGAACAAGGTGTACCTCCTTATAAGAAGCCCCATGATTTGAAAAAGACTTGGAAAGTGTCTGTTTTGGCGGCAGTCATCAAACACATGTCTCCTGATTTGGATAAACTGAAAAGGTTGGTTACTCAGTCCAAGACTTTGCAGGATAAGATGACAGCCAAAGACAGTGCAACTTGGTACAAAGTGATGAACCAAGAAGAAGCTTTGTTACCACTAACTGACAAGTGCCTAAAAATATCTCCTTCAAAGGAAGATGAAAACCAAGAGGGTGAAAGCTCTTCTTGTGTTTTGGATGAATCCGTTTCACCTGGCAAAAGTGAGAAAAGGAAGAGTGTGTTTGATTTAGGTGCTGCTGCTGAAAAATTATATGCTTGTCAAAAAATTGTGTGTCCACAAAGTGAATTATCTACGGGGTTCACAGATAAAAACTCGAGGATGGACCATGAATCACTCTGTGCTTATCGCCCCGAGGGAACCCATGTTCCCTTCCATGATTTTATCTCGGATGATGAACGAATCACAAGTGTATATGATTGGTTGAATATGGAAATAACAAGGGGTAATCAGAATGAAGTGAATGATGTGGGAGAGATTGCAGGTGAGACATTTGATTACAATAATATAAGCCACTGGTTGAATAGCATTGATGATCTTGAATTGCAAGCTGCAATGGAACTAGTAAAAGATAACGTGGACTTGACAGCACAGATTCAACAAGGCCAACAGGAAGCAGCCTCAATTTGGGACTTGGAATACAATCCAGTGCAAGAGTAA 1374 0.4207 MVVINEVIDPYAQEETETEAEAEGMDYDQLKKRMCKDRILLQKLKEKRDKDEPEQHAKQEASRRKKMSRAQDSVLKYMVKIMEVCNAQGFVYGIIPEKGKPISGSSDSLREWWKDQIRFDQNAPTAIANYLPLLEKDEVDPTSFVHLLQDLQDSTLGSILSALMQHCVPPQRRFPLERGISPPWWPKGKELWWGEQGLLAQEQGVPPYKKPHDLKKTWKVSVLAAVIKHMSPDLDKLKRLVTQSKTLQDKMTAKDSATWYKVMNQEEALLPLTDKCLKISPSKEDENQEGESSSCVLDESVSPGKSEKRKSVFDLGAAAEKLYACQKIVCPQSELSTGFTDKNSRMDHESLCAYRPEGTHVPFHDFISDDERITSVYDWLNMEITRGNQNEVNDVGEIAGETFDYNNISHWLNSIDDLELQAAMELVKDNVDLTAQIQQGQQEAASIWDLEYNPVQE* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03852 457 MobiDBLite consensus disorder prediction 44 68 - -
Rops11g03852 457 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 14 362 IPR006957 GO:0003700|GO:0005634
Rops11g03852 457 FunFam Ethylene insensitive 3-like 1 139 275 - -
Rops11g03852 457 MobiDBLite consensus disorder prediction 281 302 - -
Rops11g03852 457 Gene3D - 56 138 IPR023278 GO:0003700|GO:0005634
Rops11g03852 457 Gene3D - 139 275 IPR023278 GO:0003700|GO:0005634
Rops11g03852 457 Pfam Ethylene insensitive 3 29 267 IPR047091 GO:0003700
Rops11g03852 457 SUPERFAMILY DNA-binding domain of EIN3-like 145 269 IPR023278 GO:0003700|GO:0005634
Rops11g03852 457 FunFam Ethylene insensitive 3 family protein 56 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03852 Rops-Chr11 72386427 72387800 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03852 21 354 EIL Transcription Factor Family AT5G10120 57.637 5.58e-131 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Rops11g03852 EIN3 9.7e-114 No_clan