Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03239 ATGATGATGATGTTTGATGAAATGGGGCTTTCTGGTGATTTGGATATGTTATCTGCTCCCCTTGGAGAAGGGGATATTACCGCCCGGCCAACTGAGCCAGAGGCGATAGTTGAGGATGATTATAGTGACGAAGAAATTGAGGTAGATGAACTTGAGAGGAGGATATGGAGGGACAAAATGCATCTCAAGCGATTAAAGGAACAAAGTAAACCTAAGGAAGGAATTGATGCAGCTAAGCAGAGGCAATCCCAAGAACAGGCAAGGAGGAAAAAGATGTCAAGGGCTCAAGATGGAATCTTGAAGTACATGTTGAAAATGATGGAGGTTTGTAAGGCCCAAGGATTTGTTTATGGTATAATTCCCGAGAAGGGAAAACCAGTGACTGGGGCATCTGATAATCTTCGTGAATGGTGGAAGGATAAAGTTAGGTTTGATCGCAATGGTCCAGCTGCCATAGCCAAGTATCAAGCAGACAATTCAATCCCAGGGAAGAATGATGGATGCAATTCTATTGGTCCAACTCCACACACCTTGCAAGAGTTACAGGACACGACCTTGGGTTCTCTCTTGTCAGCACTCATGCAGCACTGTGACCCCCCTCAGAGGCGGTTTCCATTGGAGAAGGGCATTCCTCCACCATGGTGGCCCACAGGGAATGAAGAATGGTGGCCCCAAATTGGTTTACCTACAGATCAAGGTCCTCCACCTTACAAGAAACCTCATGACCTGAAGAAGGCATGGAAGGTTGGTGTTCTGACTGCAGTTATCAAGCACATGTCTCCTGATATCGCCAAGATTCGCAAGCTTGTGAGGCAGTCCAAATGCCTTCAAGATAAAATGACAGCCAAGGAAAGTGCAACCTGGCTTGCAATCATCAATCAAGAGGAGGCCTTGGCACGTGAGCTTTACCCTGATTATTGCCCCCCATTAGCCTCAACTGGAGGTAGTGGATCTTTTGCTGCCAATGATTGCAATGAGTATGATGTTGAAGGGGGTGAGGATGAGCCAAATTTCGATGTGGAAGACCGGAAACCTGAGAATCTTCATCTATCCAATCTTGGGATGGACAGAATGAGGGTAAGACTGCCAGTTCAGCAGCCTTCTTTCCCAATCAAGGGAGAGGGTGTAACAAACTTTGATTTCATTCGGAAGAGGAAAATCTCTAGTGACTTTAACATGATGGATCAGAAAATTTACACTTGTGAACACCCTCAGTGTCCTTACAGTGAAGGTCGCCTTGGTTTTCAAGACAGGACTTCTAGGGACAATCATCAATTGAATTGTCCATATAGAGGCACTTCTTCAGATTATGGTGGTCCAAATTTTCATGTTAATGAGGTAAAGCCAGTCATATTCCCCCAGTCCTTTGTTCAACCCAAATCTACTACCCAGTCTGTTAATTTGGTTCCAACTTCAATTGACCTAACTGGACCCGGAGTTCCAGAAGAAGGCCAGAAAATGATTAGTGACCTTATGTCAATCTATGAAACAAATGTTCAAGGCAACAAGAACTCGAGTCCCAGTACTCGTGTAACTGCAGAAAATCTGAACTTTTCTCAGCCCAGCATTCCGCAGCAACAGGACAATTACTTCCGTGGTCAAGGAATTGTCATGGACGGAAACTTATTTGAAGAAGCCAACTTGTCTAATAATCATCACATGTTTGCAAGAGAGGAAGGTCAATTTGACCGGTTCAAAGCCTTGAATTCTCCTTTTGAGACTGCCAATCACAGCAACAATAATTTCCATTTGATGTTTGGGTCCCCTTGTGATTTCGGATCCTTTGATTTTAAGGATGATATGCAAGGAGTAGGGATGGATGCTCTTCAGAAACAACCAGATATTTCAATGTGGTACCAGTGA 1863 0.4428 MMMMFDEMGLSGDLDMLSAPLGEGDITARPTEPEAIVEDDYSDEEIEVDELERRIWRDKMHLKRLKEQSKPKEGIDAAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQADNSIPGKNDGCNSIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGIPPPWWPTGNEEWWPQIGLPTDQGPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALARELYPDYCPPLASTGGSGSFAANDCNEYDVEGGEDEPNFDVEDRKPENLHLSNLGMDRMRVRLPVQQPSFPIKGEGVTNFDFIRKRKISSDFNMMDQKIYTCEHPQCPYSEGRLGFQDRTSRDNHQLNCPYRGTSSDYGGPNFHVNEVKPVIFPQSFVQPKSTTQSVNLVPTSIDLTGPGVPEEGQKMISDLMSIYETNVQGNKNSSPSTRVTAENLNFSQPSIPQQQDNYFRGQGIVMDGNLFEEANLSNNHHMFAREEGQFDRFKALNSPFETANHSNNNFHLMFGSPCDFGSFDFKDDMQGVGMDALQKQPDISMWYQ* 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03239 620 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 17 601 IPR006957 GO:0003700|GO:0005634
Rops11g03239 620 FunFam Ethylene insensitive 3-like 1 169 306 - -
Rops11g03239 620 FunFam Ethylene insensitive 3-like 1 81 159 - -
Rops11g03239 620 Coils Coil 34 68 - -
Rops11g03239 620 Gene3D - 173 306 IPR023278 GO:0003700|GO:0005634
Rops11g03239 620 Pfam Ethylene insensitive 3 49 296 IPR047091 GO:0003700
Rops11g03239 620 Gene3D - 81 158 IPR023278 GO:0003700|GO:0005634
Rops11g03239 620 MobiDBLite consensus disorder prediction 66 92 - -
Rops11g03239 620 SUPERFAMILY DNA-binding domain of EIN3-like 175 299 IPR023278 GO:0003700|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03239 Rops-Chr11 61479887 61482966 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03239 3 619 EIL Transcription Factor Family AT3G20770 61.503 0.0 734
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Rops11g03239 EIN3 2.6e-130 No_clan