Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02684 ATGTCATTTGCAAAATCAAGTCTACTGATGTCTTCCGATGATGTCAAGGCTGCTGTTACTGAATTTGCTAGGGGATTTAACCACGGTTACTATCATCCCCTGCACATAGCAATACTAAAAGGTGATTGGGAATCTACAAAGGCTTTCCTTGATAGTGACCCAAGTGCATTGACTGCAAAGGTCACCATACTTGGAAGGACTGCACTTCATGTTGCAGCTGTAGGAGGTCAGTGGCACATTGTTGAGAAGTTGGTGCAACATATGCCTGTACATGTACTAGCAGAGCTAGACTTGATGGGTTGTACTTGCTTGCATTATGTTGCAATGGGTGAAAGCATAATGGCTGCCAAGGCATTGGTGACAAAAAATCCTTCTCTGACACAACTCACTGACTATAAAGGATTCACACCACTCATCTATAGTATTACCTTTACCAGATGTAAAGAGATGGTGTGGTATCTTGTTTTGAACACTACAGATGAGAGTCCTGGCTGTCCATTCTCTGGTCCTTCCGCTGGTCAACTTGTTGCTTTGCTTACTGCTGTTGGATTTCATGATATTACCATGTATCTTCTCCAACGCTACCCTAACTTGGCCACTATTTCTGATTCAAATGGAAGCATTATACTTAATGTTTTGTCAAAATTGCCCTCACACTTCCAAAGTGGAAATAAGCTTGGCTTTTGGGGAAGATGCATTTACCACTGTGTTCCAGTGGAATGCACTTTGAGAGGAGATCTGAAAGATTCTTATGGGCAGTCAAGCCATCACCAATCTCATTTTGGAGCTACAATATGGAATGCACTTCAAAATCTTGTTCCTAGCATAAAGCTAGACAGAGATGCAAAGTTGAGACATTCATCTGCTGTGAGATTGGTAGAATTTGTTTGCTCACAAGTTTCAAACATAAATGACTCTCAATTCTGGCAATCTTTTGTGAGTGCAGAAATTGTTTACAATGCCACATCATCTGGCATTGTTGAAATTTTAAGGATTTATTTCCAGTTTTTTCCTGATTTAGTTTGGACTCGCATACCAAATGAAGGATATGTAGCTCGAATTGCCATCAAGAGTCGGCAAGAAAAGGTTTTTAGTCTTCTATTGAAGATGCCAATAATTTGTAAGTTTTTAGTCTTGCCATTAGATGAATCACAGAGCACCATATCACATATGGCAGCAAGGTTTGCTTCTCCTCAACCGGCATCAATTTCTGGTGCAGCATTTCAAATGCAAAAAGAGTTACAGTGGTTTAAGGAAGTAGAGAAATTGGATCACCCTCTCCACAAAGAAGTTAAAAACAAAGATGGTAAAACACCTTGGCAATTGTTTAGGGAAGAGCATAAAACATTGCTTGAAGAAGGGAAGAATTGGATGAAGGATACATCAAACTCTTGTATGTTAGTGGCAACTCTTATTGCTACAGCTGTCTTTGCTGCTGCTATCACAGTACCAGGAGGTAACAACCAGGACAAAGGATTTCCAATATTCTTGCCAGATAACACATTCATGGTGTTTATTGTATCAGATGCATTAGCATTGTTTTCCTCAATGGCTTCTCTTCTGATGTTCTTAGCAATCCTAAATGCACGGTATGAGGAGGAAGATTTTCTCAAGGCATTACCCCAGAGATTAATATTAGGTTTGGCTTCTTTGTTCTTTGCCATAGTGACTACAATGATAGCATTTGGCGCAGCTCTGTCTTTGTTGCTACGGCAGAGACTAAAATGGGCTCCAATTCAAATTGCTCTTCTGGCTTGTGTCCCAATTGCTCTGTTTGCAAAGCTTCAACTTCCCTTATTCATACAAATGATCACATCAACATATGGATCTCGCATATATCATCGTCAAAGTCTTTGGTAA 1860 0.4 MSFAKSSLLMSSDDVKAAVTEFARGFNHGYYHPLHIAILKGDWESTKAFLDSDPSALTAKVTILGRTALHVAAVGGQWHIVEKLVQHMPVHVLAELDLMGCTCLHYVAMGESIMAAKALVTKNPSLTQLTDYKGFTPLIYSITFTRCKEMVWYLVLNTTDESPGCPFSGPSAGQLVALLTAVGFHDITMYLLQRYPNLATISDSNGSIILNVLSKLPSHFQSGNKLGFWGRCIYHCVPVECTLRGDLKDSYGQSSHHQSHFGATIWNALQNLVPSIKLDRDAKLRHSSAVRLVEFVCSQVSNINDSQFWQSFVSAEIVYNATSSGIVEILRIYFQFFPDLVWTRIPNEGYVARIAIKSRQEKVFSLLLKMPIICKFLVLPLDESQSTISHMAARFASPQPASISGAAFQMQKELQWFKEVEKLDHPLHKEVKNKDGKTPWQLFREEHKTLLEEGKNWMKDTSNSCMLVATLIATAVFAAAITVPGGNNQDKGFPIFLPDNTFMVFIVSDALALFSSMASLLMFLAILNARYEEEDFLKALPQRLILGLASLFFAIVTTMIAFGAALSLLLRQRLKWAPIQIALLACVPIALFAKLQLPLFIQMITSTYGSRIYHRQSLW* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02684 619 SMART ANK_2a 133 165 IPR002110 GO:0005515
Rops11g02684 619 SMART ANK_2a 99 128 IPR002110 GO:0005515
Rops11g02684 619 SMART ANK_2a 29 59 IPR002110 GO:0005515
Rops11g02684 619 SMART ANK_2a 64 94 IPR002110 GO:0005515
Rops11g02684 619 Pfam Domain of unknown function 456 567 IPR026961 -
Rops11g02684 619 Gene3D - 7 163 IPR036770 -
Rops11g02684 619 PANTHER CASKIN 64 609 - -
Rops11g02684 619 SUPERFAMILY Ankyrin repeat 33 214 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02684 Rops-Chr11 46267794 46288041 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02684 328 590 Miscellaneous Gene Families AT3G12360 24.275 2.07e-13 71.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g02684 11 46267794 46288041 Rops11g02684 11 46267794 46288041 ECH