Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01626 ATGAACATTGCCTTGTCTCAACCACCCTCAACACCAGCAACTGAATCTTCAGACACAAAAAGGAGAGGCAGAGTAGTGTACCCAATTGGGTATGGTGCAGATCCTACAGGGGCAAATGACAGCAGTGATGCCATTTTGAAAGCTTTAATAGATGCTTTTGGGATGGAGAGTGAGCTTGAGTTGCTGCCAGGAATTAGAGACCTTGGAGGTGTTGTGATTGATCTGCAAGGTGGAAACTACAAAATCAGCAAACCCATCACATTTCCTTCATCTGGTATTGGCAATGTTGTGGTAGAAGGAGGAACCTTGAGAGCATCTGATACATTTCCTACTGATAGGCATCTTGTTGAGTTATGGTCATCAAATTCCCACAAGCTCCAAAAAACAACAGCATCCAACCATCTTGATGACTTAAACAGCAAGAAACTTCAACAAACTATAGGGATTTATTATGAAGACATAACATTTAGAGACATCCTCTTTGATTCAAGCTACAAGGGTGGAGGAATTTTCATCATTGATTCAGCTCGAATCAGGATTAACAATTGCTTCATCCTCCATTTCACCACTGAAGGAATCCTAGTACAACATGGCCATGAGACCCTCATATCAAGCTGTTTCCTTGGACAACACTCAACAGTTGGTGGAGACAAAGGGGAGAGACAATTCTCAGGCACTGCCATTGATCTTGCTAGCAATGACAATGCAATCACTGATGTTGCAATTTTCTCAGCAGCCATTGGGATTGTTCTAAGGGGGCAGGCTAATATAATCACAGGGGTGCATTGTTATAACAAGGCAAGTGGTTTTGGTGGCATTGGTATTTTGGTGAAGTTAGCAGGGAATTCACAAACTAGAATTGACAATTGTTACTTGGATTATACAAGTATAGTCATGGAAGATCCAGTTCAAGTTCATGTCACTAATGGATTTTTCTTAGGGGATGCTAATATTGTTTTGAAGTCAATTAAGGGACAAATTTCCGGTTTAAATATAGTTGATAATATGTTCAGTGGTAACCCCAATAACAAGGTTCCAATTGTAACTCTTGATGGGAAATTTAGTACCATTGGTCAAGTGGTGACTGATAGGAACAATGTGAATGGCATGAGCTTGAGATCAACAGTTGGGAAGTTAACTGTGGATGGAAATGGTTCAAAATGGGTGGCTGATTTTTCAAATATTTTGGTATTTCCTAATCGGATTAGTCATTTTCAGTATTCATTTTACTCCCGAGAGGAGCCCAAGTTTTTGGCACATTCAGTGACCAATGTGTCAAACAATGTTGTAGTTGTGGAGAGTGAGAAACCAGTTCGGGGGGTTGTTTCCTTCTTGGTTGAACAGTGA 1347 0.4053 MNIALSQPPSTPATESSDTKRRGRVVYPIGYGADPTGANDSSDAILKALIDAFGMESELELLPGIRDLGGVVIDLQGGNYKISKPITFPSSGIGNVVVEGGTLRASDTFPTDRHLVELWSSNSHKLQKTTASNHLDDLNSKKLQQTIGIYYEDITFRDILFDSSYKGGGIFIIDSARIRINNCFILHFTTEGILVQHGHETLISSCFLGQHSTVGGDKGERQFSGTAIDLASNDNAITDVAIFSAAIGIVLRGQANIITGVHCYNKASGFGGIGILVKLAGNSQTRIDNCYLDYTSIVMEDPVQVHVTNGFFLGDANIVLKSIKGQISGLNIVDNMFSGNPNNKVPIVTLDGKFSTIGQVVTDRNNVNGMSLRSTVGKLTVDGNGSKWVADFSNILVFPNRISHFQYSFYSREEPKFLAHSVTNVSNNVVVVESEKPVRGVVSFLVEQ* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01626 448 Gene3D - 30 437 IPR012334 -
Rops11g01626 448 FunFam Polygalacturonase QRT3 28 443 - -
Rops11g01626 448 PANTHER POLYGALACTURONASE QRT3 5 448 IPR039279 GO:0004650
Rops11g01626 448 SUPERFAMILY Pectin lyase-like 41 397 IPR011050 -
Rops11g01626 448 MobiDBLite consensus disorder prediction 1 22 - -
Rops11g01626 448 MobiDBLite consensus disorder prediction 1 16 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01626 Rops-Chr11 24794160 24796510 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g01626 11 24794160 24796510 Rops11g01626 11 24794160 24796510 ECH