Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01622 ATGAGTTTCACTTACAGCTTCACTTTACTCACTTCCTACTTCTTCTTGTGTCTCCTCTCACCTCCTTCATCCGCTTCTATCTTCTCTGATTTGGATGCAACACAACACAGCACCCTCAACAAAGCCCTGAAAAGGCTTACCCCAACAAACGCCACCTCAGCATGTATTGAAACTGGAGATTTAGAAAAAAGAGGTGATTTGTTTCCACAGATTCTAAGAGATGAGGCAGTGGCAAGACTTAATGAGCTTGGAAAGGTGAGTGATGCTAGTGGCTATCTGGAGAGGACATTTTTAAGTCCTGCAACCAAGAGGGCAATTAATCTTATTCGTAAATGGATGGAGGATGCTGGTTTGAGAACTTGGGTGGACCAAATGGGAAATGTCCATGGTCGAGTTGAGGGTGCAAATGCAAATGCTGAAGCTTTATTGATGGGATCTCACATGGACACTGTTGTTGATGCTGGGATGTTTGATGGATCACTAGGAATAGTCTCAGCAATATCTGCAGTAAAGGCTATGCATGTCGATGGAAAGCTGCATAAGCTAAGGCGCCCTGTCGAGGTGATTGCATTTTGTGATGAAGAGGGTGTCAGATTTCAAACTACTTTCTTGGGAAGTGGTGCTGTAGCTGGTATTTTACCTCCCACAACATTGGAGATATCTGATAAGAGGAATGTAACAATAAAAGATGTTCTTAAGGAGAACTCAATAGAAACTACAGAGGAAAGTTTTTTACAGCTCAAGTATGACCCAAAATCTGTTTGGGGTTATGTCGAGGTTCACATTGAGCAGGGCCCTGTGCTAGAACAAGTTGGTTTCCCACTTGGTGTAGTTAAAGGCATAGCTGGGCAGACACGATTGAAGGTTACAGTTAGAGGCTCGCAAGGTCATGCCGGAACTGTTCCAATGTCCATGCGCCAGGATCCTATGGCTGCTGCTGCTGAACTAATCGTGGTTATGGAAAGCCTCTGTAAACATCCTGAAGAACACCTTTCTTATGATGGTCATTGCAGTGATTCATCGGTGAAATCACTTTCAAGTTCACTTGTGTGTACTGTTGGAGAGATATCAACATGGCCAAGTGCCAGCAATGTCATTCCAGGCCAGGTTACATATACAATTGATATAAGAGCTATTGATGACCTTGGACGTGAGGCTGTTATCTATGATTTATCCCAACGAATTTATCAAATATGTGACAAGCGTTCAGTTTCCTGTGTTATTGAACACAAGCATGATGCAGGTGCTGTGCTGTGTGATTCTGAACTGAATTCACAGCTCAAATCTGCAGCTTATTCTGCACTAAAGAGGATGGAGGGTGACATTCAGGATGAAGTACCAACATTAATGAGTGGAGCAGGGCATGATGCAATGGCAATATCTCACTTAACAAAGGTGGGAATGCTATTTGTGCGCTGTCGTGGAGGAATAAGTCACTCTCCACAAGAGCACGTGCTAGACAATGATGTTTGGGCAGCTGGTTTAGCAACCTTGTCATTTCTGGAAAACCTACAATAA 1518 0.4341 MSFTYSFTLLTSYFFLCLLSPPSSASIFSDLDATQHSTLNKALKRLTPTNATSACIETGDLEKRGDLFPQILRDEAVARLNELGKVSDASGYLERTFLSPATKRAINLIRKWMEDAGLRTWVDQMGNVHGRVEGANANAEALLMGSHMDTVVDAGMFDGSLGIVSAISAVKAMHVDGKLHKLRRPVEVIAFCDEEGVRFQTTFLGSGAVAGILPPTTLEISDKRNVTIKDVLKENSIETTEESFLQLKYDPKSVWGYVEVHIEQGPVLEQVGFPLGVVKGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMAAAAELIVVMESLCKHPEEHLSYDGHCSDSSVKSLSSSLVCTVGEISTWPSASNVIPGQVTYTIDIRAIDDLGREAVIYDLSQRIYQICDKRSVSCVIEHKHDAGAVLCDSELNSQLKSAAYSALKRMEGDIQDEVPTLMSGAGHDAMAISHLTKVGMLFVRCRGGISHSPQEHVLDNDVWAAGLATLSFLENLQ* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01622 505 PANTHER ALLANTOATE DEIMINASE-RELATED 58 503 IPR010158 GO:0016813
Rops11g01622 505 Pfam Peptidase dimerisation domain 283 395 IPR011650 -
Rops11g01622 505 FunFam Allantoate deiminase 283 415 - -
Rops11g01622 505 NCBIfam hydantoinase/carbamoylase family amidase 76 497 IPR010158 GO:0016813
Rops11g01622 505 SUPERFAMILY Bacterial exopeptidase dimerisation domain 283 415 IPR036264 -
Rops11g01622 505 SUPERFAMILY Zn-dependent exopeptidases 68 504 - -
Rops11g01622 505 Pfam Peptidase family M20/M25/M40 143 493 IPR002933 GO:0016787
Rops11g01622 505 ProSitePatterns ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 142 151 IPR001261 -
Rops11g01622 505 Gene3D - 283 415 - -
Rops11g01622 505 CDD M20_bAS 77 502 - -
Rops11g01622 505 Gene3D Zn peptidases 87 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01622 Rops-Chr11 24754113 24759336 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g01622 11 24754113 24759336 Rops11g01622 11 24754113 24759336 ECH