Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02519 ATGACGCTCAACTTAGCGGGAGGAGCCGCCATTGGTGCCCTGCTCCTATGTGTTGCTATTTCTCTCTTTCACATTGCTGGGGCTGAAGATCCTTACAGGTTCTTCAACTGGAATGTTACCTATGGGGATATTTACCCACTTGGAGTTCGCCAAAGGGGAATACTAATCAATGGGCAATTCCCAGGTCCAGACATTCATTCTGTTACCAATGACAACCTCATCATCAATGTCTTTAACAGCTTGGATGAGCCCTTTCTTCTTTCCTGGAATGGGATCCAGCAGAGAAGGAACTCATTCGAAGATGGTGTATTTGGAACAACATGCCCCATCCCACCAGGGAGGAACTTCACTTACATTCTTCAGGTGAAGGATCAGATTGGAAGCTTTTATTACTTTCCATCTCTTGCATTCCACAAAGCTGCTGGTGGTTTTGGAGGCATAAGGATCCTCAGCAGGCCAAGAATTCCAGTCCCTTTCCCTGATCCAGCTGGTGATTACACTGTTCTCATTGGAGATTGGTACAAGTCCAACCACACAACTTTGAAAGCCCATCTTGATAGGGGCAAGAAGCTGCCTGTGCCTGATGGAGTCCTCATCAATGGTCGTGGACCCAATGGAGTGTCTTTCAACGTAGAACAAGGGAAGACTTACAGGCTTAGAATATCAAATGTGGGATTGCAACATTCCCTTAACTTTCGCATCCAGAACCACAAATTGAAGTTGGTGGAAGTGGAAGGGACACACACCCTTCAAACTACCTATTCCTCACTTGACGTTCATGTGGGGCAATCTTATTCAGTGCTAGTAACTGCTGATCAACCTGCTCAGGACTACTACATTGTGGTTTCCACACGATTCTCTTATAAGGTTCTCACAACTACTGGAGTACTACGATACAGCAACTCTGCAGGCCCAGTATCAGGCCCACCCCCTGGTGGACCTACAATTCAAATTGATTGGTCTTTGAACCAGGCTCGCTCAATCAGGACAAACCTTACAGCAAGTGGACCAAGGCCAAACCCACAAGGGTCCTACCATTACGGTCTCATAAACACAACCAAGACCATTGTATTGGCCAGTTCAGCTGGTCAAGTAAATGGAAAACAAAGATACGCAATTAACAGCGTGTCTTATGTTGCTCCTGACACACCTCTTAAGCTCGCAGATTACTTCAAAATCTCAGGTGTTTTCCGCGTCGGAAGCATATCAGACAGACCCACTGGTGGTGGCGTTTACCTTGACACTTCTGTAATGCAAGCTGACTACAGATCTTTCGTAGAGATTGTGTTCCAAAACAACGAGAACATCGTTCAGAGCTATCATCTTGATGGCTACTCTTTCTTTGTGGTTGGTATGGATGGAGGACAGTGGACAACTGCTAGCAGGAACCAGTACAATCTCCGAGATGCAGTTGCGCGTTGCACCACTCAGGTATATCCCAACTCATGGACTGCGATTTATGTTGCCCTTGACAACGTGGGAATGTGGAACTTGAGGTCTGAGTTTTGGGCACGACAATACCTTGGCCAACAGTTTTATTTGCGCGTTTATACATCATCAACCTCAATCAGAGACGAGTTTCCTGTTCCAAAGAATGCACGTCTCTGTGGTAAGGCAAGTGGGAGACACACGCGACCCCTTTGA 1644 0.4647 MTLNLAGGAAIGALLLCVAISLFHIAGAEDPYRFFNWNVTYGDIYPLGVRQRGILINGQFPGPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQQRRNSFEDGVFGTTCPIPPGRNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSRPRIPVPFPDPAGDYTVLIGDWYKSNHTTLKAHLDRGKKLPVPDGVLINGRGPNGVSFNVEQGKTYRLRISNVGLQHSLNFRIQNHKLKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPAQDYYIVVSTRFSYKVLTTTGVLRYSNSAGPVSGPPPGGPTIQIDWSLNQARSIRTNLTASGPRPNPQGSYHYGLINTTKTIVLASSAGQVNGKQRYAINSVSYVAPDTPLKLADYFKISGVFRVGSISDRPTGGGVYLDTSVMQADYRSFVEIVFQNNENIVQSYHLDGYSFFVVGMDGGQWTTASRNQYNLRDAVARCTTQVYPNSWTAIYVALDNVGMWNLRSEFWARQYLGQQFYLRVYTSSTSIRDEFPVPKNARLCGKASGRHTRPL* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02519 547 Gene3D - 163 338 IPR008972 -
Rops10g02519 547 PANTHER MULTI-COPPER OXIDASE 51 512 IPR045087 -
Rops10g02519 547 SUPERFAMILY Cupredoxins 349 538 IPR008972 -
Rops10g02519 547 CDD CuRO_2_AAO_like_1 164 299 IPR034271 -
Rops10g02519 547 FunFam Monocopper oxidase-like protein 349 546 - -
Rops10g02519 547 SUPERFAMILY Cupredoxins 28 179 IPR008972 -
Rops10g02519 547 Pfam Multicopper oxidase 39 152 IPR011707 GO:0005507
Rops10g02519 547 Pfam Multicopper oxidase 165 301 IPR001117 -
Rops10g02519 547 Gene3D - 32 153 IPR008972 -
Rops10g02519 547 Gene3D - 348 543 IPR008972 -
Rops10g02519 547 CDD CuRO_1_AAO_like_1 34 149 IPR034273 GO:0005507
Rops10g02519 547 FunFam L-ascorbate oxidase homolog 32 153 - -
Rops10g02519 547 CDD CuRO_3_AAO_like_1 381 501 IPR034275 GO:0005507
Rops10g02519 547 SUPERFAMILY Cupredoxins 159 339 IPR008972 -
Rops10g02519 547 FunFam Monocopper oxidase-like protein 163 337 - -
Rops10g02519 547 Pfam Multicopper oxidase 383 519 IPR011706 GO:0005507|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02519 Rops-Chr10 43982539 43991448 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02519 10 43982539 43991448 Rops10g02519 10 43982539 43991448 ECH
Rops9g02557 9 47933866 47940775 Rops10g02519 10 43982539 43991448 PCT