Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02497 ATGCTTGATTCCGTTCTTTTGGCACTTTTCCTTCCTTGCCTTGGCATGAGTGCCATTTTCATAGTCTACATGTGCCTTCTTTGGTACGCGACTACCCATCATCGCCCTGATGTAAGGTCACCGGCGAAGCCTGTCGCCAACAAGGGGTTGTCCCCTTTGGAGCTGGAGAAGCTTCCCAAAATCACTGGAAAAGAATTGGTCTCCGCCACCGAATGTGCCGTGTGCCTGGATGAGATTGAGAATGATCAACCGGCTCGACTGGTTCCAGGTTGCAACCACGCCTTTCATCTAGAATGTGCGGATACTTGGCTTTCTAAGAACCCACTCTGTCCCGTTTGTAGAGCCAAGCTTGATCCTCAGATTTTCAATGATGAAAGTCCATGTTGA 387 0.4935 MLDSVLLALFLPCLGMSAIFIVYMCLLWYATTHHRPDVRSPAKPVANKGLSPLELEKLPKITGKELVSATECAVCLDEIENDQPARLVPGCNHAFHLECADTWLSKNPLCPVCRAKLDPQIFNDESPC* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02497 128 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 35 120 IPR013083 -
Rops10g02497 128 ProSiteProfiles Zinc finger RING-type profile. 72 114 IPR001841 -
Rops10g02497 128 SMART ring_2 72 113 IPR001841 -
Rops10g02497 128 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 16 120 - -
Rops10g02497 128 Pfam Ring finger domain 71 114 IPR001841 -
Rops10g02497 128 SUPERFAMILY RING/U-box 71 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02497 Rops-Chr10 43596472 43597440 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02497 10 43596472 43597440 Rops10g02497 10 43596472 43597440 ECH
Rops9g02573 9 48155328 48155714 Rops10g02497 10 43596472 43597440 PCT