Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02456 ATGGACCGACGCTGGCCCTGGAAGAAAAAATCATCTGACAAGACTGTGATTGAAAAAGCAGCTGTTGCATTAGACTCCTCCGATGCTTCCAATCAGGATAACCCCAAGAAACCCAACCACGTCCAAATCTCTGTGGAATCCTACTCACATCTGTCTGGTTTGGAGGATCAAGTGAAAACATATGAGGAAAAAGTTCAGGCACTTGAGGATGAGATCAAGGAAATGAATGAAAAACTGTCAGCAGCAAACTCTGAGATCAATACCAAGGAAAGCATGGTAAAACAACATGCTAAAGTCGCTGAAGAAGCTGTCTCAGGTTGGGAAAAGGCTGAAGCTGAAGCTTTGGCATTGAAGAACCATCTAGAATCTGTCACACTTTTAAAACTCACTGCTGAGGATCGTGCATCGCATTTAGATGGTGCTCTTAAAGAATGTATGAGACAGATAAGGAACCTTAAGGAAGAACATGAACAGAAAATACAGGAAGTTGCTCTCTCAAAAACCAAGCAATTAGACAAGATCAAGGGGGAGCTTGAGGCTAAGATAGCTAACTTTGAACAGGAACTCCTTAGGTCTGCTGCTGAAAATGGAGCTCTGTCAAGGTCCTTGCAGGAGCGCTCTAACATGCTAATCAAATTAAACGAAGAAAAAGCTCGTGCTGAAGCTGAAATTGAGCTTCTTAAGAGCAACGTAGAATCGTGTGAAAGAGAAAATAATTCACTTAAATATGAACTTCATGTTCTTTCTAAAGAGCTTGAAATTCGCAATGAAGAAAAAAACATGAGTATGAGGTCTGCAGAGGCTGCTAACAAGCAGCATATGGAGGATGTCAAAAAAATTGCCAAGTTAGAGGCTGAGTGCCAGAGATTACGTGGTCTAGTGAGGAAAAAATTACCTGGCCCTGCTGCACTTGCACAGATGAAGCTAGAAGTTGAAAGTCTTGGCCGAGATTATGGAGAAAGTCGATTAAGGAAGTCTCCTGTGAAACCTGCTACCCCTAATCTGTCCCCATCACCTGAGTTTTCGATGGAGAGCATACAGAAATTCCAGAAGGAGAACGAATTTCTTACAGAACGTTTATTGGCAATGGAAGAAGAAATGAAGTTGCTGAAAGAAGCTTTGGCTAAACGCAACAGTGAATTGCAGGCCTCAAGGAGTATGTGTGCTAAAACACTAAGCAAACTTCAAACTTTGGAAGCACAGCTTCAGACAGGTAACCCGCAGAAAGGATCTCCAAAATCCATCACACAGATAACCCATGAAAGCGTTTATAGTCAAAACGCGAGCTATGCACCAAGTTTGATCTCCATGTCTGAAGATGGAAATGATGATGCAGGAAGTTGTGCTGGGTCTTGGTCTACAACAATTAAGAAGCTGGAACTAATGGATGACTTTCTGGAGGTGGAGAAGTTAGCTTGTTTATCAAATGATTCCAATGTAGATGCCACTGTTCCAGTTTCTTCAAACAATATGACAACTGACATTGTGACCAATGATGTATCAGAAGTCAGTACTAGGAAAGATGGTCCATCTGAAAAGAATGGCGATTCAAATCCATTGCCAGATCAAGTGTCTTCCAGTGCTTTGATTTCAGCACCTGATCCCCAATCTGATGTCAGTGGCTTGTTATTACAACAGCTTAGATCAAGAATATTACAGGTTTTGGAGTCCGTAGCTAAGGATCCTGATATAGGGAAGATTGTGGATGATATTAAACATGCGCTAGAAGATTCACCTAACACTGCCATCAACCACTCTGTAGGTTTCACTTCCCAGGTTGCCCAGCTTTCTGATGCTACAAGTGATAGGCAGGATAATCCTGAAGATGCTGGCTTAAACCTTGAAAAGGAAACCATTTCATCCCCGCAACCCAATGAATATGTACAGATAACTTCAGATTTGGAAGCCGCAATATCTCAGATTCATGACTTTGTATTGTTCCTAGGCAAAGAAGCAATCACATTTCATGACATTTCTTCCGATGGAAATGAAATGAGCCAAAAGATTGAGGAGTTCTCTGTCACCTTCAACAAAGTTTTATGCAACAATGCAAGTTTACTACAGTTTGTTCTTGACCTGTCTTACGTTCTAGCTAAAGCAAGTGAATTCAGATTTAATGTCCTTGGCTACAAGGGTACAGAAGCTGAAACTAACACTCCTGATTGCATAGATAAGATTGCTTTGCCTGAAAATAAGTTAGTTCAAGACAATTCATCTGGAGAAAGATATCAAAATGGTTGTTCTCATGTTCTTAATCCCTGTTCTGATCCTGAGGTTCCTGATGATGGAAATTTGGTCTCAGGCTACAAAGCAAATGTTGCATCACAGAAAATCTCAATGGAAGAATTTGAAGAATTGAAACTAGAGAAAGAGAAAGTAGTGATTGATCTGTCAAATTGTACAGAGAATCTTGAAATGACAAAGTCTCAATTGCTAGAAACTGAGCAACTTCTGGCAGAAGTTAAATCACAATTGGCTTCTGCTCACAGATCAAACAGCTTGGCCGAGACACAGTTAAAGTGTATGGCAGAGTCGTACAAATCACTTGAAACACGTGCCCAGGAGTTTGAAACTGAGCTGAACCGTCTACAAATAAAGACAGAAACTCTGGAGAATGAGCTTAAAGATGAAAAGAAGGCTCATGAAGCTGCTTTTGCCAAGAGCAAGGAGCTAGAAGAGCAGTTACAAAGGATTGAGGGCTCATCAGCTGTTAATGACCACAACAAGACTTCGCAGGATAGAGATTTGGTGGCTGCTGCTGAAAAGCTTGCTGAGTGTCAAGAAACCATATATCTTCTTGGCAGGCAGTTAAATGCTCTACGTCCTCAAAATGAGCCAATTGAATCTCCACACGGTAAAGCAAATCCAAAGGTTGAAGGCCTCACAGTGGATGAACCTACTACTAGTAGCCCAAATTTTCAAGAATTGGGTCAGTTGGAGATGGACAGTGCCACTTCTGCTTTTGTACAAAGACTTGATTCGGAGTCACCATTGCATTTTTCCAACAGTTTATTTAGCCCATCAGATAATGAGTCAAACCTTCCAGCCAGATCTCCAGTACAACATGCAAAATCAAAACCAAGACACAGACCTACCAAGTCAGCCTCTTCTTCAGCTTCTTCCGCCACCACACCAGAAAAACATGCACGAGGATTTAGTAGATTCTTTTCATCAAAAGGAAAACCTGCTCATTGA 3195 0.4131 MDRRWPWKKKSSDKTVIEKAAVALDSSDASNQDNPKKPNHVQISVESYSHLSGLEDQVKTYEEKVQALEDEIKEMNEKLSAANSEINTKESMVKQHAKVAEEAVSGWEKAEAEALALKNHLESVTLLKLTAEDRASHLDGALKECMRQIRNLKEEHEQKIQEVALSKTKQLDKIKGELEAKIANFEQELLRSAAENGALSRSLQERSNMLIKLNEEKARAEAEIELLKSNVESCERENNSLKYELHVLSKELEIRNEEKNMSMRSAEAANKQHMEDVKKIAKLEAECQRLRGLVRKKLPGPAALAQMKLEVESLGRDYGESRLRKSPVKPATPNLSPSPEFSMESIQKFQKENEFLTERLLAMEEEMKLLKEALAKRNSELQASRSMCAKTLSKLQTLEAQLQTGNPQKGSPKSITQITHESVYSQNASYAPSLISMSEDGNDDAGSCAGSWSTTIKKLELMDDFLEVEKLACLSNDSNVDATVPVSSNNMTTDIVTNDVSEVSTRKDGPSEKNGDSNPLPDQVSSSALISAPDPQSDVSGLLLQQLRSRILQVLESVAKDPDIGKIVDDIKHALEDSPNTAINHSVGFTSQVAQLSDATSDRQDNPEDAGLNLEKETISSPQPNEYVQITSDLEAAISQIHDFVLFLGKEAITFHDISSDGNEMSQKIEEFSVTFNKVLCNNASLLQFVLDLSYVLAKASEFRFNVLGYKGTEAETNTPDCIDKIALPENKLVQDNSSGERYQNGCSHVLNPCSDPEVPDDGNLVSGYKANVASQKISMEEFEELKLEKEKVVIDLSNCTENLEMTKSQLLETEQLLAEVKSQLASAHRSNSLAETQLKCMAESYKSLETRAQEFETELNRLQIKTETLENELKDEKKAHEAAFAKSKELEEQLQRIEGSSAVNDHNKTSQDRDLVAAAEKLAECQETIYLLGRQLNALRPQNEPIESPHGKANPKVEGLTVDEPTTSSPNFQELGQLEMDSATSAFVQRLDSESPLHFSNSLFSPSDNESNLPARSPVQHAKSKPRHRPTKSASSSASSATTPEKHARGFSRFFSSKGKPAH* 1065
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02456 1064 Coils Coil 51 92 - -
Rops10g02456 1064 MobiDBLite consensus disorder prediction 1000 1064 - -
Rops10g02456 1064 MobiDBLite consensus disorder prediction 516 535 - -
Rops10g02456 1064 SUPERFAMILY Tropomyosin 782 943 - -
Rops10g02456 1064 Coils Coil 346 380 - -
Rops10g02456 1064 Pfam Filament-like plant protein, long coiled-coil 89 946 IPR008587 -
Rops10g02456 1064 Coils Coil 804 824 - -
Rops10g02456 1064 MobiDBLite consensus disorder prediction 596 618 - -
Rops10g02456 1064 MobiDBLite consensus disorder prediction 489 504 - -
Rops10g02456 1064 MobiDBLite consensus disorder prediction 943 973 - -
Rops10g02456 1064 MobiDBLite consensus disorder prediction 321 340 - -
Rops10g02456 1064 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 1059 - -
Rops10g02456 1064 MobiDBLite consensus disorder prediction 1000 1019 - -
Rops10g02456 1064 Coils Coil 839 901 - -
Rops10g02456 1064 MobiDBLite consensus disorder prediction 489 535 - -
Rops10g02456 1064 Coils Coil 135 195 - -
Rops10g02456 1064 Coils Coil 203 286 - -
Rops10g02456 1064 MobiDBLite consensus disorder prediction 1032 1047 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02456 Rops-Chr10 42938268 42944005 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02456 10 42938268 42944005 Rops10g02456 10 42938268 42944005 ECH
Rops9g02624 9 49160331 49166166 Rops10g02456 10 42938268 42944005 PCT