Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02453 ATGGGTACGGTTTCTTTGAAAATAGGGGATGGAACTGCCAGATTCAAAAGAGCTACTGTGTGTTCTTCAGCAGTTAACATTCTCATGATCTTGTCTGTTATCACCACCAATCTTTTCGCCCTTTATGCTTTCACTTCTTCACCAAAAGACAATCACACCGAGCTACTTCACCAAGCCCACAAGAATTTCTCTCTCATCTCAGAGCAGGTCTCGCTGATTTTGAGAGAGATTGATCAATCTCAGAAGAAATTGGCCCAGATAGAGAAAGAGCTTCTTGGCTATGAAAGCATTGATCTTTCCAGACCCAACATTGCAAATGAACTCAAACTCTTTCTCCAGCGCCATCAGCTCCCTCTGGGCAAAGATTCCAAAACTGGAATCACTGAAATGGTGCCATCTGTTGGCCATTCTTGTGAGAAATCTGCAGACTTGTTGTCTCAGTACATGAATTACAAAGTTTTTGGACCCTGCCCTGATGATTGGAGTGTTGCACAGAAACTCATCTTGAGAGGGTGTGAGCCTTTGCCTAGAAGGAGGTGTTTTGCTAAGTCTGTTTCTAAGGTAGGCCTTCATCCTTTTCCCACCTCACTTTGGAAACCTGTTGGTAATAAGACTGTTAATTGGAGTGGTCTCAGTTGTAAGAATTTTGAATGTTTGAAAGGTAAGAAGTTGAGCAAAGAGTGCATTGGTTGCTTTGATTTGGTTAATGGGTATGAGAATCAGAGGTTTGTCAAGTCTAGGAGTAAGAATGATTTTCTCATTGATGATGTTTTAGCCCTGGGAAGTGGTGGAATTAGAATAGGGCTTGACATGGGAGGTGGGTCTGGATCCTTTGCTGCTACAATGGCTGATAGGAATGTTACTGTGATTACTAGCACTCTGAACATTGATGCTCCATTCAGTGAATTCATTGCTGCAAGAGGACTTTTTCCTCTTTACTTAAGCTTAGATCATAGGTTCCCATTCTATGACAATGTGTTTGATTTGGTTCGTGCTTCAAGTACCTTAGATGTTGAAGGGAAGCCAGAGAAGTTGGAGTTTCTAATGTTTGACATTGATCGTATTTTGCGGGCTGGTGGTTTGTTTTGGTTGGATAACTTCTATTGTGCCAATGAAGAGAAGAAAAAAGCATTAACTCGGTTGATTGAACGGTTTGGATATAAAAAATTGAAATGGGTTGTGGGAGAAAAAGCTGATAGTTTTGGATCAGGCAAATCTGAAGTTTTCTTATCAGCTGTCCTTCAGAAGCCTGTAAGGGTGTAA 1263 0.4125 MGTVSLKIGDGTARFKRATVCSSAVNILMILSVITTNLFALYAFTSSPKDNHTELLHQAHKNFSLISEQVSLILREIDQSQKKLAQIEKELLGYESIDLSRPNIANELKLFLQRHQLPLGKDSKTGITEMVPSVGHSCEKSADLLSQYMNYKVFGPCPDDWSVAQKLILRGCEPLPRRRCFAKSVSKVGLHPFPTSLWKPVGNKTVNWSGLSCKNFECLKGKKLSKECIGCFDLVNGYENQRFVKSRSKNDFLIDDVLALGSGGIRIGLDMGGGSGSFAATMADRNVTVITSTLNIDAPFSEFIAARGLFPLYLSLDHRFPFYDNVFDLVRASSTLDVEGKPEKLEFLMFDIDRILRAGGLFWLDNFYCANEEKKKALTRLIERFGYKKLKWVVGEKADSFGSGKSEVFLSAVLQKPVRV* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02453 420 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN-RELATED 23 419 - -
Rops10g02453 420 Gene3D Vaccinia Virus protein VP39 235 402 IPR029063 -
Rops10g02453 420 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 262 364 IPR004159 GO:0008168
Rops10g02453 420 Coils Coil 70 97 - -
Rops10g02453 420 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 245 388 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02453 Rops-Chr10 42860796 42862807 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02453 10 42860796 42862807 Rops10g02453 10 42860796 42862807 ECH
Rops9g02627 9 49259870 49261487 Rops10g02453 10 42860796 42862807 PCT