Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02444 ATGACTCATTCCCTTTTCCTCCTCCCTTTTCTACTCCTCATTCTCCTTGCCGCCACGAAAGTGCCATTTCCAGCGGAAGCTGGCAATGGAGGAGAGTGGCAACTCCTTCAACAAAGCATAGGCATCGTTGGCATGCACATGCAGTTAATGCACAACGACCGTGTCGTCATTTTCGACCGCACTGACTTCGGCTTATCAAATCTAACCTTATCCCATGGCAGATGCCGTAATAACCCAAGAGAGATGGTGGTAAAAACTGACTGCACCGCTCACTCCGTAGAATACGACGTCGCATCCAACACATTCCGACCACTCTTTGTACAAACCAACGTATGGTGTTCATCAGGGTCGGTGGCTCCCGACGGCACACTCTTCCAAACCGGTGGCTTCAACGACGGTGACCGTACAGTGAGGACCTTCAATCCATGCCCCACATGTGACTGGAAGGAAATTAACCATGGACTTGCAGCTAGAAGATGGTATGCAACCAATCACGTGTTGCCAGATGGACGACAAATTGTGATTGGAGGTAGAAGACAATTTAATTACGAGTTTTTTCCCAAGAAGGAAGCAACAGCTAAGAATACATACAGTTTACCCTTTCTGGTACAGACCAATGATGCTGGCATTGAGAACAACCTTTACCCCTTTGTTTTCCTCAACGTGGATGGCAACCTTTTTATCTTCTCCAACAACCATGCTATCTTGTTTGACTATAATAACAACAACGTTGTGAGGACATACCCTTCGATACCAGGTGGAGATCCCAGATGTTATCCTAGTACCGGTTCTACTGTTTTGCTACCTTTGCAAGCACCTTTTGTGGAAGCTGAGGTTTTGATTTGCGGTGGAGCCCCAATAGGGGCTTTTCAACAGACACTACAGGGTCGGTTTGTCGGAGCCTTGAAAACATGTGCTCGGATCAAAATCACTGACCCGAAACCACAGTGGACCATGGAGACCATGCCGGGTGGTAAAGTCATGAATGACATGGTCATGCTCCCAAACGGCAACGTTTTGCTTATCAATGGAGCAGCTGTGGGGACAGCCGGATGGGAATCGGGTCGAAAGCCGGTTTTGAACCCGTTTCTTTATAAAACGAATGCTCCAGTCGGGTCCCGGTTTGAGTTGCAAAAATCAACCAGCATTCCCAGGATGTACCACTCTACAGCGGTTTTACTTCGTGATGGTAGAGTGCTTGTTGCTGGGAGCAATCCTCATCTGTATTATAATTTTAGCAATGTGTTATTCCCAACTGAATTGAGTTTGGAAGCATTTTCTCCTTCGTATCTGGAGCCTCGATTCTCGAACGTGCGTCCGAGAATTGTGTTTCCTGCTATTTCTTCCCAATCTCAAATCAAACTCAAGTACGCGCAGAAGTTGAAGGTTCAATTCCAGGTTTCAGCAACATTGGTTCTTGATTCAGTATCGGTGACAATGCTGGCGCCACCTTTTAATACTCATTCATTCTCCATGAATCAGAGGCTGTTGGTGCTGGAGCAAAACAATTTGAGTAATATTGGGGATTCAATGTATGAAGTTGAGGTGACTACACCCGGTTCAGCTATCCTTGCACCACCCGGTTTCTATTTACTATTTGTGGTCCACCAAGAAATTCCAAGTGAGGGTATTTGGGTCCAAATACTGTGA 1650 0.4636 MTHSLFLLPFLLLILLAATKVPFPAEAGNGGEWQLLQQSIGIVGMHMQLMHNDRVVIFDRTDFGLSNLTLSHGRCRNNPREMVVKTDCTAHSVEYDVASNTFRPLFVQTNVWCSSGSVAPDGTLFQTGGFNDGDRTVRTFNPCPTCDWKEINHGLAARRWYATNHVLPDGRQIVIGGRRQFNYEFFPKKEATAKNTYSLPFLVQTNDAGIENNLYPFVFLNVDGNLFIFSNNHAILFDYNNNNVVRTYPSIPGGDPRCYPSTGSTVLLPLQAPFVEAEVLICGGAPIGAFQQTLQGRFVGALKTCARIKITDPKPQWTMETMPGGKVMNDMVMLPNGNVLLINGAAVGTAGWESGRKPVLNPFLYKTNAPVGSRFELQKSTSIPRMYHSTAVLLRDGRVLVAGSNPHLYYNFSNVLFPTELSLEAFSPSYLEPRFSNVRPRIVFPAISSQSQIKLKYAQKLKVQFQVSATLVLDSVSVTMLAPPFNTHSFSMNQRLLVLEQNNLSNIGDSMYEVEVTTPGSAILAPPGFYLLFVVHQEIPSEGIWVQIL* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02444 549 SUPERFAMILY E set domains 445 548 IPR014756 -
Rops10g02444 549 PANTHER SECRETED PROTEIN-RELATED 10 548 - -
Rops10g02444 549 Pfam Galactose oxidase-like, Early set domain 445 548 IPR015202 -
Rops10g02444 549 SUPERFAMILY Galactose oxidase, central domain 93 432 IPR011043 -
Rops10g02444 549 CDD E_set_GO_C 435 548 IPR015202 -
Rops10g02444 549 Gene3D - 27 434 IPR037293 -
Rops10g02444 549 Gene3D Immunoglobulins 444 549 IPR013783 -
Rops10g02444 549 Pfam Glyoxal oxidase N-terminus 45 284 IPR009880 -
Rops10g02444 549 FunFam Aldehyde oxidase GLOX 27 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02444 Rops-Chr10 42775094 42777007 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02637 9 49450157 49451785 Rops10g02444 10 42775094 42777007 PCT