Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02416 ATGAGGAGTCACGACTCCCCATACGAGACTGGCAATGACACGTGTCAACAGGGAAATCGAAATCGAAATCGTTGGTGGTGGAGTAGAAGAAGAATGGCGGCAGAGGGACAAGTGATTGGTGTCCACAGCGTGGATGAGTGGAAGGGACATCTCGAGAAGGGAAATGAGTCCAAGAAACTGATTGTAGTGGATTTTACTGCTTCTTGGTGTGGCCCATGCCGTTTCATTGCCCCAATTCTAGCAGAGATTGCTAAGAAGTTGCCGAATGTCACCTTCCTTAAGGTTGATGTGGATGAATTGAAGACTGTTGCTGAGGAATGGGGCATTGAGGCTATGCCAACCTTCCTGTTCTTGAAAGAAGGCAAACAAGTGGACAAGATTGTGGGTGCTAAGAAGGAGGAGCTGCAACTGACAATATCTAAGCATGCAACTGCTGCTGCTTGA 444 0.4775 MRSHDSPYETGNDTCQQGNRNRNRWWWSRRRMAAEGQVIGVHSVDEWKGHLEKGNESKKLIVVDFTASWCGPCRFIAPILAEIAKKLPNVTFLKVDVDELKTVAEEWGIEAMPTFLFLKEGKQVDKIVGAKKEELQLTISKHATAAA* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02416 147 ProSitePatterns Thioredoxin family active site. 62 80 IPR017937 -
Rops10g02416 147 NCBIfam thioredoxin 55 142 IPR005746 GO:0015035
Rops10g02416 147 PANTHER THIOREDOXIN 38 141 - -
Rops10g02416 147 Gene3D Glutaredoxin 15 146 - -
Rops10g02416 147 CDD TRX_family 50 134 - -
Rops10g02416 147 Pfam Thioredoxin 42 139 IPR013766 -
Rops10g02416 147 FunFam Thioredoxin 37 144 - -
Rops10g02416 147 SUPERFAMILY Thioredoxin-like 34 142 IPR036249 -
Rops10g02416 147 PRINTS Thioredoxin family signature 108 119 - -
Rops10g02416 147 PRINTS Thioredoxin family signature 69 78 - -
Rops10g02416 147 PRINTS Thioredoxin family signature 61 69 - -
Rops10g02416 147 ProSiteProfiles Thioredoxin domain profile. 1 144 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02416 Rops-Chr10 42364714 42366900 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02416 10 42364714 42366900 Rops10g02416 10 42364714 42366900 ECH
Rops9g02656 9 49728865 49730244 Rops10g02416 10 42364714 42366900 PCT