Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02358 ATGACCTCGGACGGAGCAACATCGACGGCGACGAATCGGAGGAAACCGTCGTGGAGGGAGAGAGAGAACAACAGGAGGAGAGAGAGGAGAAGAAGAGCCATGGCAGCGAAGATATACTCTGGTCTTAGGGCTCAGGGGAATTACAACTTACCAAAACACTGTGATAACAACGAGGTATTGAAAGCTCTCTGTGCTGAAGCTGGTTGGACCGTAGAAGAAGATGGCACCACTTATCGCAAGGGATCCAGGGCAGCACCCCAAGGCGACGGTGCAGGAACCTCCACCAGAAACACCCCATTCTCTTCACAAAATCCAAGTCCTCTTTCGTCATCTTTTCCAAGCCCAATCCCTTCCTACCAAGTCAGTCCCTCTTCCTCTTCCTTTCCAAGCCCTTCTCGTTTGGATGCAAACAATGCATCAAACCTCATTCCATATATCAGGAATGTGTTCCCTGCGTCTCTTCCTCCTTTGAGAATATCAAACAGTGCCCCTGTAACGCCACCTCTCTCATCACCAACCTCAAGAGATGCTAAACCTATTCCCACTTGGGAATCAATTGCCAAGGCATCCATGTCATCCTTCAATCACCCTTTCTTTGCAGCTTCCGCACCTACTAGCCCATCACACCGTCACCTTTATACCCCACCTACTATACCTGAATGTGATGAGTCTGATACTTCCACTGTTGAGTCTGGACAGTGGTTTAACTTCCAAGCCTTTGTACCTTCTGCATCTGCAGTGCCAATCTCTCCCACCTTGAACTTTATTAGACCTATGAGTCAGCAGCATAACCAACTGTCTGATAAGAGAGTCCAAGAAATGAGAAGTTCAGAGCCAAACTTTGGGGCACAGGTGAAGCCTTGGGTTGGGGAAAGGATTCATGAAGTGGGATTGGATGATTTGGAGCTCACACTTGGAAGTGGGAAGAATCCTAGTTAG 939 0.4846 MTSDGATSTATNRRKPSWRERENNRRRERRRRAMAAKIYSGLRAQGNYNLPKHCDNNEVLKALCAEAGWTVEEDGTTYRKGSRAAPQGDGAGTSTRNTPFSSQNPSPLSSSFPSPIPSYQVSPSSSSFPSPSRLDANNASNLIPYIRNVFPASLPPLRISNSAPVTPPLSSPTSRDAKPIPTWESIAKASMSSFNHPFFAASAPTSPSHRHLYTPPTIPECDESDTSTVESGQWFNFQAFVPSASAVPISPTLNFIRPMSQQHNQLSDKRVQEMRSSEPNFGAQVKPWVGERIHEVGLDDLELTLGSGKNPS* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02358 312 MobiDBLite consensus disorder prediction 76 132 - -
Rops10g02358 312 MobiDBLite consensus disorder prediction 1 31 - -
Rops10g02358 312 Pfam BES1/BZR1 plant transcription factor, N-terminal 12 139 IPR008540 -
Rops10g02358 312 MobiDBLite consensus disorder prediction 88 132 - -
Rops10g02358 312 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 7 309 IPR033264 GO:0003700|GO:0006351|GO:0009742
Rops10g02358 312 MobiDBLite consensus disorder prediction 14 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02358 Rops-Chr10 41615890 41617593 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Rops10g02358 BES1_N 6.8e-59 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02358 10 41615890 41617593 Rops10g02358 10 41615890 41617593 ECH
Rops9g02298 9 42438610 42440822 Rops10g02358 10 41615890 41617593 PCT