Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02129 ATGGCCTTGTCAAGCCCACAAACACCAAGATTCCTGTCAAGCAAGCTCCATAGCCACTCCACATCTAAGAATGTCCACAGAAACAGCTTTACCATTACGAGCAGAAGCAGGTGCTGCTCTGCCATAGCCATTGATGCCCCATCATCTCTCACTGAGGCGCCTGCTATAAGATGGGGATCCATAGCTTTGCAGGGTCTCCGTGAAGAGATGGAAGATGATATTGTTGTTCGACCTGATGGCCTTGATCGCTTCTCTTTTGCAGCTGTCTTTGATGGACATGGAGGGTTTTCTTCTGTTGAGTTTCTCAGGGATGAGCTGTACAAGGAGTGTCTTGAAGCTTTACAAGGTGGGTTACTATTAGTTGAGAAAGATTTCACAGCCATTAAAGAAGCATTACAGGAAGCATTTGTAAAAGCTGACACGAGGTTGTTAAAATGGCTTGAAATGAATGGGGAAGAGGACGAGTCAGGTGCTACAGCAACTGCAGTGTTCTTAGGAGATGATAAGCTGCTAATTTCACATATTGGTGATGCATCTGTGGTTCTATGCAGATCCGGAAAAGCAGAAGTGCTGACTAGTCCTCACCGACCATGTGGAAGCAACAAGTCTTCTCTTCAAGAAATCAAAAGAGTCAGAGAAGCAGGTGGATGGCTTGTCAATGGTAGAATTTGTGGAGACATTGCTGTATCTCGTGCATTTGGGGACTTGAGATTCAAAACAAAGAAGAATGAGATGCTGCGAAAAGGAGTTCAGGAAGGAAGATGGTCAGAAAAGTTTATATCTCGTGTACAGATCAACAGTGACTTGGTTATTGCATACCCTGATATTTATCAAGTAGCACTTGGCTCAGATGCAGAATTCATATTATTGGCATCTGATGGCTTATGGGATTACATGAGCAGCTCAGATGCAGTTTCTATTGTGAGGGATCAACTACGAAAACATGGAAACATTCAGCTAGCTTGTGAAGTGCTTGCACAAGCCGCTTTGGACCGACGTACACATGATAATGTCAGCATTATAATTGCAGATTTAGGGCGGACAGACTGGCAGAATGTGCCACTGCAGCAACAAAATATTGTATTTGAGCTGGTCCAAGCCCTTGCCACCATTGGAATTGTGTCTTTTGGAATCTGGTTTTCATCACAGCTTTCTTTATAG 1161 0.4384 MALSSPQTPRFLSSKLHSHSTSKNVHRNSFTITSRSRCCSAIAIDAPSSLTEAPAIRWGSIALQGLREEMEDDIVVRPDGLDRFSFAAVFDGHGGFSSVEFLRDELYKECLEALQGGLLLVEKDFTAIKEALQEAFVKADTRLLKWLEMNGEEDESGATATAVFLGDDKLLISHIGDASVVLCRSGKAEVLTSPHRPCGSNKSSLQEIKRVREAGGWLVNGRICGDIAVSRAFGDLRFKTKKNEMLRKGVQEGRWSEKFISRVQINSDLVIAYPDIYQVALGSDAEFILLASDGLWDYMSSSDAVSIVRDQLRKHGNIQLACEVLAQAALDRRTHDNVSIIIADLGRTDWQNVPLQQQNIVFELVQALATIGIVSFGIWFSSQLSL* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02129 386 SUPERFAMILY PP2C-like 50 346 IPR036457 -
Rops10g02129 386 Gene3D - 56 352 IPR036457 -
Rops10g02129 386 ProSiteProfiles PPM-type phosphatase domain profile. 57 345 IPR001932 -
Rops10g02129 386 PANTHER PROTEIN PHOSPHATASE 2C 34 343 IPR015655 GO:0004722|GO:0006470
Rops10g02129 386 SMART PP2C_4 47 343 IPR001932 -
Rops10g02129 386 FunFam Protein phosphatase 2C 57 56 352 - -
Rops10g02129 386 Pfam Protein phosphatase 2C 59 338 IPR001932 -
Rops10g02129 386 ProSitePatterns PPM-type phosphatase domain signature. 86 94 IPR000222 GO:0043169
Rops10g02129 386 CDD PP2Cc 56 345 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02129 Rops-Chr10 38549745 38554688 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02129 1 322 PP2C-type Phosphatase Gene Family AT4G27800 63.692 6.56e-146 415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02129 10 38549745 38554688 Rops10g02129 10 38549745 38554688 ECH
Rops10g02129 10 38549745 38554688 Rops9g02261 9 41862645 41864273 PCT