Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01125 ATGCCTTCCTTGTTATTGTTGGTCTTTCTGATTCAAACATGGCCAATGAAGCTACAAGCTGAAAGAAACATCTTTATCTTGGCAGGGCAAAGCAACATGGCCGGAAGGGGCGGTGTAGTGAATGACACGGCCACCGGAATCACCAACTGGGACGGCGTCGTTCCACCACAGTGCCGTCCCAATCCATCGATTCTGAGACTCAACGCACAGCTAAGGTGGGTGGAAGCACATGAACCGATCCACAAAGACATAGATACACAGAAGACAAATGGGATTGGACCAGGTATGGCATTTGCAAATTCGATCTTGAAAAAGCACCATGAACTTGGTATGATTGGTTTGGTGCCTTGTGCGATTGGTGGCACCAACATAAGTGAATGGGAACGGGGAAAAGAGCTTTACAACCACATGATGAAGAGGGTTAAGGCTTCCTTGCAAGATGGTGGAACTGTTCGAGCCTTGCTTTGGTTTCAAGGAGAGTCTGATACAGTGAATCTAAATGATGCCCAATCATATCAAAGAAGAGTTCAGAAGTTTTTCTTGGATGTTCGTGATGATCTGCAGTCTCCATTGCTTCCCATAATTCAGGTGGCTTTGGCATCAGGAGCAGGCCCTTACATAGAGATAGTAAGACAAGCTCAACTGGGTATTGACCTACTGAACCTGAAAACTGTGGACGCTAAGGGTTTGCCCCTTGAGCCCGATAATCTCCACCTTTCTACCCCGGCCCAGGTTGCTCTTGGGCACATGATGGCTAATGCATTCCTTCAGTTTGTGCCCACTTCAACTCCAAATATACATGACCATAACACAAACCAAATGAGGTGGGTGGAAGCACATGAAAATGGGGCCTTTCTTAAAGACATTGAAAAATGGAGGCCTAAACCAGCTGGGATTGGACCAGGAATGGCATTTGCGAATTCTATATTGGAAAAGCACCCTGAACTTGGTGAAGTGGGTTTGGTGCCTTGTGCGATTGGTGGCACCAACATAAGCTAG 999 0.4675 MPSLLLLVFLIQTWPMKLQAERNIFILAGQSNMAGRGGVVNDTATGITNWDGVVPPQCRPNPSILRLNAQLRWVEAHEPIHKDIDTQKTNGIGPGMAFANSILKKHHELGMIGLVPCAIGGTNISEWERGKELYNHMMKRVKASLQDGGTVRALLWFQGESDTVNLNDAQSYQRRVQKFFLDVRDDLQSPLLPIIQVALASGAGPYIEIVRQAQLGIDLLNLKTVDAKGLPLEPDNLHLSTPAQVALGHMMANAFLQFVPTSTPNIHDHNTNQMRWVEAHENGAFLKDIEKWRPKPAGIGPGMAFANSILEKHPELGEVGLVPCAIGGTNIS* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01125 332 Gene3D SGNH hydrolase 260 332 IPR036514 -
Rops10g01125 332 Pfam Carbohydrate esterase, sialic acid-specific acetylesterase 22 257 IPR005181 -
Rops10g01125 332 Pfam Carbohydrate esterase, sialic acid-specific acetylesterase 264 332 IPR005181 -
Rops10g01125 332 Gene3D SGNH hydrolase 22 259 IPR036514 -
Rops10g01125 332 PANTHER ESTERASE, PUTATIVE (DUF303)-RELATED 263 332 - -
Rops10g01125 332 SUPERFAMILY SGNH hydrolase 23 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01125 Rops-Chr10 23327627 23335760 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01125 10 23327627 23335760 Rops10g01125 10 23327627 23335760 ECH
Rops9g02180 9 39881194 39883687 Rops10g01125 10 23327627 23335760 PCT