Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01110 ATGAGCCAGTGGATACATGTTGCGGTGGCAGCAGCTGCTGTTGGATGTGTTTCAACCATTTTGTTGGTTTTTATTTGGCGTTGGTGTCATCACAAGAAGGGTAGAAATTTTGTTGAACCAGCTAGCTTGATCAGAATGGAGAGTCTACAAGCAGGGAATTCTAGACTTCATCATCAACCTAGTTTTCATCACCAATTAGATCAGGGGAGCAAGAACAAGGGGAATTATCATGTTTTTCGTGGTGGGGTATCTGGAAGAAGAACTTTGTTTAGCTGGGATGATCATCCATCTGTTGCTGTTGATGCTGGTGAAAATGGTTGGTCTAGATTTGCTTTCAAGGAATACAAGAGTTATATGCCATCTCCATCAAAGAGGGCTGCACTGTTAGGAGTATGTGCAGCACCACCAGGTGATTATGGAAGAGAATCAGAGGCAGAGATAAGCTGGGAAGTTTCACGTGGATCAGCTGAGTTTATGCAGAAGGTAAGACTCAATCCTGGGATGAAAAAGTCTCATCAAATTAACCCTTCTATGAGCGTTGCTTCTGTTATTAGAACAGCTTTGCCTCTACCTGGTCCTTGTTTTGGAAACTATGCCTTCCCACGAGAAGCTTATTTTGAAATTACCATCTTGTATTCTCGTGGTGATGATTATGAATCGGTTGGAAAGAGTGGAGAAGGTGAGAAGACTAAGCTCCTTGTTCAGGGTAATTCAAATGCTAAGGATAATTCGGAGGCTTTGGTTCATGTTACAAGTAGCAATGGACATAAAATCAACAATGTTGAAGAAATGAAGCTTGATAGCAAAGAGGGTGGGAAGAGTGAATCTGTGAAGTTCTCATTGGGATTAACAGCTGGAGGTTCTGTTCTTACAAAAGTTCCTGGCAGCTACCCTGGTAGCATTGGGTTCAACTCCAATGGTTCTGTCTATCTTGATGGTATGAAACTTGTATTTGAATCCGAGAAGGCAGAATGGGTAGGAACAGATAAGGTGATTGGTTGTGGATTTGATCCAAGGCATAAGAAAGTTTACTTCACATTAGACTCAGAATTAGTGCTTGTCATCCACTGCCAGTCAGAGGAATTTGGCACTCCACTCTATCCAACCTTGGCTGCAAATACAGACATTCTTGTATTAGTTAATTTAGGACAAAGTCCCTTTAAATATGCACCTGCAAATGCTCAGAGAACACCAAATCCATGCTTCATAGCCCCACTTGTAAATTCCCCTGCTGCTACATTGGGCTATGATGATAGCAAGGAGCTATTCTCTATGGGAAGGATTGATTCTCAGTGGCTTAATAGGTCTACAACCAAAGGAAGCCACAACACCAATCGAACAATGGACTTTGATGAGGAGTCTGAGGCTGATCTATTTGAAATTGTCTTAGATGGTTCTGGAAAATCTCCAAACATAGCATCATAG 1425 0.4182 MSQWIHVAVAAAAVGCVSTILLVFIWRWCHHKKGRNFVEPASLIRMESLQAGNSRLHHQPSFHHQLDQGSKNKGNYHVFRGGVSGRRTLFSWDDHPSVAVDAGENGWSRFAFKEYKSYMPSPSKRAALLGVCAAPPGDYGRESEAEISWEVSRGSAEFMQKVRLNPGMKKSHQINPSMSVASVIRTALPLPGPCFGNYAFPREAYFEITILYSRGDDYESVGKSGEGEKTKLLVQGNSNAKDNSEALVHVTSSNGHKINNVEEMKLDSKEGGKSESVKFSLGLTAGGSVLTKVPGSYPGSIGFNSNGSVYLDGMKLVFESEKAEWVGTDKVIGCGFDPRHKKVYFTLDSELVLVIHCQSEEFGTPLYPTLAANTDILVLVNLGQSPFKYAPANAQRTPNPCFIAPLVNSPAATLGYDDSKELFSMGRIDSQWLNRSTTKGSHNTNRTMDFDEESEADLFEIVLDGSGKSPNIAS* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01110 474 SUPERFAMILY Concanavalin A-like lectins/glucanases 290 389 IPR013320 -
Rops10g01110 474 PANTHER IMMUNOGLOBULIN SUPERFAMILY MEMBER 5 48 463 IPR043364 GO:0098609
Rops10g01110 474 Gene3D - 168 397 IPR043136 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01110 Rops-Chr10 23051430 23054036 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01110 10 23051430 23054036 Rops10g01110 10 23051430 23054036 ECH
Rops9g02194 9 40186415 40188263 Rops10g01110 10 23051430 23054036 PCT