Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01081 ATGGAGGATGTTGAAGACAAGTTGCCCTCTGACTCCTCTTCAAAAATTGCTGAAGAGACACGACTCGCAGAACATGTTGAAGACAAGCTGCCCTCTGACTCATCTTCAAAAATTGCTGAAGAGACACGACTGAGAGAACATGTTGAGGGCAAGCTGCCCTCTGACTCCTCTTCAAAAACTGCTGAAGAGGCACCACTGGTAGAACATGTTGAGGGCAAGCTGCCCTCTGACTCATCTTCAAAAATTGCTGAAGAGACACGACTGACAGAACATGTTGAGGGCAAGCTGCCCTCTGACTCCTCTTCAAAAACTGCTGAAGAGGCACCACTGGCAGAACATGTTGAAGACAAGCTACACTCTGACTCCTCTTCAAAAATTGCTGAAGAGAGACCACTGGCAGAACATGTTGAAGACAAGCTACACTCTGAATCCTCTTCAAAAATTTCTGATGAGACACCTCTGGCAGAACATGTTGAAGATGAGCTACCCTCTGAATCCTCTTCAAAAATTACTGAAGAGGCACCACTGGCACAACCCACTGAAGAAAATACTGAAGTGATAAACCCACCAGATAATCAATCTTCCACAAAAGCTCCAACAATTCCACTTAGTAATGGAGAAGTGGAGTCTGACACTCATCTGCCGGTTAATGAATTCTCTGAATTATCAGTGTCGCCAAATTCTTCTGATGGTCAAACTATGAAGCAAGATGAGTATGCTTCCGTAAATAATTCAGCTTCAACCCCAAATGCTACAGTTGATGTGACAGAAAGAAGCCAGCAAGTACCTTTGGTTGAAAATTCTGAACCAGGTTCTGTAGAAGATATCTCTGACAGGCTTGAATTGCAGGATGATGTTTCTAATGTCACTGCCGATAGTTTTGTTGATAATGAGATTAGACTCTCAGCTTCCTCTTCTGAATCAAAAGATATGCAAAAAGATCACGATGAATTAAAGATAGCTGCAGGAACAGTTGACTCACTGACCCGTGCCAAGCTAAAAAGAGGCCTTATTGATACCGCAGCTCCATTTGAATCTGTTAAGGAAGCTGTTTCCAAGTTTGGAGGAATTGTGGATTGGAAGGCTCATAGAATCCAAACTGTGGAGAGACGCAACCTGGTAGAACAAGAACTTGAAAAAGCAAATGAGGAGATCCCAGAGTACAGAAAACAAGCAGACGCTGTTGAACAGGCAAAGGTTCAAGTACTACAGGAGCTGGATAGCACAAAGAGACTAATAGAAGAATTAAAACTTAACCTAGAGAGGGCACAAACAGAAGAGCGTCAGGCAAGACAGGACTCAGAACTTGCAAAGCTCAGAGTGGAAGAGATGGAGCAGGGTATAGCAGATGAATCGAGTGTTGCAGCCAAGGCACAACTTGAGGTTGCTAAAGCCAGGTATTCAGCAGCTGTTTCAGATTTAACAGCTGTGAAAGAGGAGCTGGAAGCATTGCATAAGGAATATGCTTCCTTAGTGACAGATAGAGATGTAGCTATTCAGAAAGCTGAAGAGGCAGTTACTGCATCAAAGGAAGTAGAGAAGTCAGTGGAAGATTTAACTATTGAACTAATCGCTGCAAAGGAGTCATTGGAGACTGCACATGCAGCACACTTGGAAGCAGAGGAACAAAGAATTGGAACAGTTATGGTAAGAGATCAAGATTCTCTCAATTGGGAGAAGGAACTTAAACAGGCTGAAGAAGAGCTCCAGAGACTCAACCAGCAAACATTGTCTGCAAAGGATCTCAAATCTAAGCTGGAAACAGCCTCTGCTTTGCTGCTTGATTTGAAAGCTGAATTAACTGCTTATATGGAATCAAAGTTGAAACAGGAAGGTGATGAAGAAGGAATCTCAAAAGCTGACATAGAAGAACCAGAGAAGAAGACACACACTGAAATACAAGGAGCAGTGGCATCAGCCAGAAAGGAACTTGAGGAAGTTAAACTTAACATAGAGAAAGCAACTGCTGAGATTAGTTGCTTGAAGGTAGCAGCTACATCATTAAAATCGGAACTCGAACAAGAAAAATCAACTCTTGCCTCCATCAAGCAAAGAGAGGGAATGGCCTCCATTGCAGTTGCATCTCTTGAAGCTGAATTGGACAAGACTAGATCAGAGATAGCTTTGGTTCAGATGAAGGAGAAAGAAGCCAAAGAAAAAATGAATGAGCTTCCCAAGAAGCTACAACTAACAGCTGAAGAGAATAATCAGGCCAACTTGCTTGCTCAAGCAGCTCGTGAAGAGCTGCAGAAAGTAAAGGCAGAAGCAGAGCAAGCCAAGGCTGGAGTAAGTACCTTGGAAAGCAGATTACTTGCGGCTCAAAAGGAGATAGAGGCTGCAAAGGCTTCGGAAAAGTTGGCTATAGCAGCAATTAAAGCATTGCAGGAGAGTGAATCAACTAGAAGCAACAATGAAGTGGACCCTTCCACTGGGGTAACACTTTCATTGGAGGAGTACTATGAGCTTAGCAAACGAGCTCATGATGCAGAAGAGCGAGCTAATATGAGGGTTGCAGCTGCTAATTCGGAAATTGAGACAGCTAAGCAGTCTGAATTGAAATCCTTTGAGAAGCTGGATGAGGTGAATAGAGAGATAGCTGCTAGAAGGGAATCTTTGAAGATGGCAATGGAAAAAGCTGAGAAGGCAAAGGAAGGTAAACTAGGTGTAGAACAAGAATTAAGAAAGTGGAGAGCTGAAAATGAGCAACGAAGAAAGGCTGGGGAGTCTGGCCAAGGAGGGGTAAACCAGAATAAAAGCCCTAGGGGTAGTTTTGAGGGGAGTAAGGAAGCAAACAATTTTGACCGGGCTCATGATGCAGCTAATCCTGCACATCACTTGTCAAGTCCAAAGGCTAATGTGCATGCAGACAATGATGAAGGTGGATCGTCCCCAGAAGCAAAACATGGGAAAAAGAAGAAGAGATCATTGTTTCCACGGGTTTTGATGTTCTTTGCTAGAAGAAAATCACATTCAACCAAGTCAGGGTAA 2988 0.4331 MEDVEDKLPSDSSSKIAEETRLAEHVEDKLPSDSSSKIAEETRLREHVEGKLPSDSSSKTAEEAPLVEHVEGKLPSDSSSKIAEETRLTEHVEGKLPSDSSSKTAEEAPLAEHVEDKLHSDSSSKIAEERPLAEHVEDKLHSESSSKISDETPLAEHVEDELPSESSSKITEEAPLAQPTEENTEVINPPDNQSSTKAPTIPLSNGEVESDTHLPVNEFSELSVSPNSSDGQTMKQDEYASVNNSASTPNATVDVTERSQQVPLVENSEPGSVEDISDRLELQDDVSNVTADSFVDNEIRLSASSSESKDMQKDHDELKIAAGTVDSLTRAKLKRGLIDTAAPFESVKEAVSKFGGIVDWKAHRIQTVERRNLVEQELEKANEEIPEYRKQADAVEQAKVQVLQELDSTKRLIEELKLNLERAQTEERQARQDSELAKLRVEEMEQGIADESSVAAKAQLEVAKARYSAAVSDLTAVKEELEALHKEYASLVTDRDVAIQKAEEAVTASKEVEKSVEDLTIELIAAKESLETAHAAHLEAEEQRIGTVMVRDQDSLNWEKELKQAEEELQRLNQQTLSAKDLKSKLETASALLLDLKAELTAYMESKLKQEGDEEGISKADIEEPEKKTHTEIQGAVASARKELEEVKLNIEKATAEISCLKVAATSLKSELEQEKSTLASIKQREGMASIAVASLEAELDKTRSEIALVQMKEKEAKEKMNELPKKLQLTAEENNQANLLAQAAREELQKVKAEAEQAKAGVSTLESRLLAAQKEIEAAKASEKLAIAAIKALQESESTRSNNEVDPSTGVTLSLEEYYELSKRAHDAEERANMRVAAANSEIETAKQSELKSFEKLDEVNREIAARRESLKMAMEKAEKAKEGKLGVEQELRKWRAENEQRRKAGESGQGGVNQNKSPRGSFEGSKEANNFDRAHDAANPAHHLSSPKANVHADNDEGGSSPEAKHGKKKKRSLFPRVLMFFARRKSHSTKSG* 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01081 995 MobiDBLite consensus disorder prediction 106 167 - -
Rops10g01081 995 MobiDBLite consensus disorder prediction 168 267 - -
Rops10g01081 995 Coils Coil 637 685 - -
Rops10g01081 995 Coils Coil 555 599 - -
Rops10g01081 995 MobiDBLite consensus disorder prediction 875 995 - -
Rops10g01081 995 MobiDBLite consensus disorder prediction 841 860 - -
Rops10g01081 995 Coils Coil 474 494 - -
Rops10g01081 995 Coils Coil 364 442 - -
Rops10g01081 995 Coils Coil 858 899 - -
Rops10g01081 995 MobiDBLite consensus disorder prediction 1 275 - -
Rops10g01081 995 MobiDBLite consensus disorder prediction 909 926 - -
Rops10g01081 995 MobiDBLite consensus disorder prediction 7 53 - -
Rops10g01081 995 Coils Coil 728 783 - -
Rops10g01081 995 Pfam Weak chloroplast movement under blue light 335 903 IPR008545 -
Rops10g01081 995 Coils Coil 693 720 - -
Rops10g01081 995 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 336 986 - -
Rops10g01081 995 Coils Coil 830 850 - -
Rops10g01081 995 MobiDBLite consensus disorder prediction 875 906 - -
Rops10g01081 995 MobiDBLite consensus disorder prediction 62 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01081 Rops-Chr10 22588061 22593942 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01081 10 22588061 22593942 Rops10g01081 10 22588061 22593942 ECH
Rops9g02224 9 40725728 40731612 Rops10g01081 10 22588061 22593942 PCT