Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01079 ATGCAAGCGGTGGGGAGGTTAGGGAGCTATATTAGTCAGGGCGTGTACACTGTTTCAGGGCCCTTTCATCCATTTGGTGGTGCTGTTGATATTGTGGTGGTGGAACAACCAGATGGGAGCTTCAAGTCCTCTCCTTGGTACGTTCGATTTGGAAAATTTCAAGGGGTCTTGAAAGCAAGGGAAAAGGTGGTTAATATTTGTGTTAATGGGGTTGAAGCTGATTTCAAAATGTATCTTGATCATAAAGGGGAAGCTTTTTTCCTCAGGGAAATTGATGCTGATGCAGAATCAATTCTCATGTGTACACCATCTTCTGTTGATGATGCAGATGATCACTCTTCTCTTAACTCCAAAAGTGGTAACTTTGATTCGGAGAATGGTAGGATTGTGAGCAGGACTAGTTCTAAACGTTCCAGAATACTCGGCCTTGTATTTGGAAGAAGGTCTTTGAAAAAGGAAGTTGAAGATGGTGGTATAAATAGGGTAGGTTCCTTGGAGCGTGCTGAGATTGCAGCCGACTTGTTGGAACTCAATTGGTCCACCAAGCTTTCTGGTAAACATAGTCAAAATATTCCAGATGCATCATCTGGGGATGCTCATGAAATGCTCATGGATGATGGCTTGCTGCATCAAGGTGAATCAAACGGTGAAGCTTCTTTTGATATTGCACAGGATGGTGAAATTGACCCGAATAGGAAGGAAGTTGCATGTGTGGAGGTCGAAGCATGTGTAGAAAAGCAATTGAATGGAGAAGAGGTTTCAGTTGTAAGCACTTTTGATGATGCACCGGGTAATGATGTTTCTGAGGAGGACATTATAGGGAGCTCCAAAGTGGGCTTGGATATGTATTGTTCCAGTGAACAAGTTCATGAGGTGTTGTATCTTGCGGATGGGGAAAGTGGAGAAATCCATGTCCATGATGAAGTATTGCATGGTGCAACTGTACTGCTATCTGAGGGTACAGAAACTGAGGAAGTCACTAAGAATGCTTATATTGGGATGCCAGTAACTGAGGTCTCTGAGTTTCATTCTCAGGCTCAGCAAATGGATTGTTCTGATTATGATGTTAGTATCTCCGATGATGTGGATGTTGAAGACCTAACAACATCTCCTAAACTTCAAAATGGCAATACAGGTCTAGCACATTGTTCAACTGACAAAGTTGAGTCGAACTGTGTTACCAAACCTTCCAGTTACAGCAGCCAGGATGACAAAGCCTTAGCTAAGAATAATATGAAGGATAAAGATGTCCCTTGCTCGTTATCATCTCCTCCGGACTGTCTTGATGATTGTTTACCTAGAAAAGCATCAAGGAGATATCTATCAGAGAGTTCAGTGGAAGAAAATTTCCTTTTTAGTGACCTTGATGAAAGTGTAACCTATGATCGATTTGAGGGATCATTTTCCCCTGAATATGTAGATCAAGAAGATCATCTTTCTTATGAGAATGGCACTGATAATTTAAGAGTGACATCCAGTCCCATAGCTATCCCTAGAAATGAGGATGCAGGGGAGGAAAAAGGGCAGCAGACAGGATCCTTGCCAAATATTTCTTCTTGTAGTATAAACCTGGGCCTACATGATGTTTGTTATCCTTTAAGCCAATCACTGGACTCGACATTTCTGGGCACAGATGACTTGAAATTTCCAAAATCAGATGAAGACAAAGAAAACCAGTTATCACATGAGGAGCCAGGTGCCAAGGATTACCACAATTCTGAGAAGCTTGAAAGTACTGTTCTGGAGCTTCCCCCTGGAGATCCATCAACACAAAACCCTTCCTCTGGTGGAAATTGGAAAATTTGGCCTTTCTCCATGAAAAGATCAGGATCTAGAGATGATATGCCACCTATTCCAAGTAATGCAAAAAATACTTCGTTTGGTAATTCTTCTGAGAATACTATTAGCACAGATGTGAACAAAATTGAGCTTAAACCCAATCTAATGAAAAAGAAGGTTAGGGAAACAACGCCAACTTCTGAACTGGTAGCATCTTTGAATCTGAAGGAGGGGAGTAACACTGTAACCTTCACTTTCTCCACAGCTGTGCTGGGGAAGCAGCAAGTTGATGCTCGAATATATTTGTGGAAATGGAATACGCGCATAGTGGTCTCAGATGTGGATGGGACAATTACAAAATCAGATGTTCTTGGTCAGTTCATGCCTTTGGTTGGTATTGACTGGTCACAGACAGGTGTTGCGCATTTATTCTCTGCTATCAAGGAGAATGGTTACCAACTTCTTTTTCTCAGTGCTCGTTCAATTTCCCAGGCCTATCTTACACGACAATTCCTACTCAACCTTAAACAGGATGGGAAGGTTTTACCAGATGGTCCTGTTGTTATTTCCCCTGATGGACTCTTTCCATCTCTATATCGAGAAGTTATCAAGAGGGTTCCTCATGAATTCAAAATTGCATGCTTAGAGAGCATCAGGGCACTTTTTCCTTCTGATTGCAATCCGTTCTATGCTGGTTTTGGAAATAGGGATACTGATGAATTCAGCTACCTTAAAGTTGGAATCCCAAAAGGAAAAATCTTCATTATTAATCCCAGGGGAGAGGTTGTTGTAAACCGACGTGTTGACACAAAATCATATACTTCTCTACATGCTCTCGTGAATGGGATGTTCCCCGCTATGAACTCTTCTGAGCAGGAGGATTTTAATTCATGGAACTTTTGGAAGCTACCCCCTCCCTCCATTGATATTTGA 2712 0.4178 MQAVGRLGSYISQGVYTVSGPFHPFGGAVDIVVVEQPDGSFKSSPWYVRFGKFQGVLKAREKVVNICVNGVEADFKMYLDHKGEAFFLREIDADAESILMCTPSSVDDADDHSSLNSKSGNFDSENGRIVSRTSSKRSRILGLVFGRRSLKKEVEDGGINRVGSLERAEIAADLLELNWSTKLSGKHSQNIPDASSGDAHEMLMDDGLLHQGESNGEASFDIAQDGEIDPNRKEVACVEVEACVEKQLNGEEVSVVSTFDDAPGNDVSEEDIIGSSKVGLDMYCSSEQVHEVLYLADGESGEIHVHDEVLHGATVLLSEGTETEEVTKNAYIGMPVTEVSEFHSQAQQMDCSDYDVSISDDVDVEDLTTSPKLQNGNTGLAHCSTDKVESNCVTKPSSYSSQDDKALAKNNMKDKDVPCSLSSPPDCLDDCLPRKASRRYLSESSVEENFLFSDLDESVTYDRFEGSFSPEYVDQEDHLSYENGTDNLRVTSSPIAIPRNEDAGEEKGQQTGSLPNISSCSINLGLHDVCYPLSQSLDSTFLGTDDLKFPKSDEDKENQLSHEEPGAKDYHNSEKLESTVLELPPGDPSTQNPSSGGNWKIWPFSMKRSGSRDDMPPIPSNAKNTSFGNSSENTISTDVNKIELKPNLMKKKVRETTPTSELVASLNLKEGSNTVTFTFSTAVLGKQQVDARIYLWKWNTRIVVSDVDGTITKSDVLGQFMPLVGIDWSQTGVAHLFSAIKENGYQLLFLSARSISQAYLTRQFLLNLKQDGKVLPDGPVVISPDGLFPSLYREVIKRVPHEFKIACLESIRALFPSDCNPFYAGFGNRDTDEFSYLKVGIPKGKIFIINPRGEVVVNRRVDTKSYTSLHALVNGMFPAMNSSEQEDFNSWNFWKLPPPSIDI* 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01079 903 MobiDBLite consensus disorder prediction 584 599 - -
Rops10g01079 903 MobiDBLite consensus disorder prediction 107 128 - -
Rops10g01079 903 MobiDBLite consensus disorder prediction 618 634 - -
Rops10g01079 903 Pfam LNS2 (Lipin/Ned1/Smp2) 656 878 IPR013209 -
Rops10g01079 903 SMART lns2 702 858 IPR031315 -
Rops10g01079 903 MobiDBLite consensus disorder prediction 548 576 - -
Rops10g01079 903 PANTHER LIPIN 1 902 IPR026058 -
Rops10g01079 903 MobiDBLite consensus disorder prediction 548 634 - -
Rops10g01079 903 Pfam lipin, N-terminal conserved region 1 98 IPR007651 -
Rops10g01079 903 SUPERFAMILY HAD-like 694 844 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01079 Rops-Chr10 22561142 22569207 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01079 10 22561142 22569207 Rops10g01079 10 22561142 22569207 ECH
Rops9g02227 9 41197875 41203915 Rops10g01079 10 22561142 22569207 PCT