Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2510 ATGACAACAATGGCAAGAACATGTTTTACCTGCTCCTTGCTTTTGGGGATGGCTTGTTCCATAGTAATTGGTGCATATGAAGAGAGCTTGTATCCTAGGAAAATTTCTAGGGGCAACTATCATGAGGCAATACAACGGTTGCAGTCATTTAAGGCCTCTCTAACTACACGTGATTCCATTGCTTCAGCACCATCTTCCTTATCACCCTTCTCAAGCCCTCCTGCTCCTGCTCCTGCTCCTTCTCCTTCTCCTCTCTCACTTCAGGGAGTGAACTATCCACGTGTGTACCATGTCACATCTTATGGTGCAGATCCAACGGGTAGTTCAGATAGCACTGAAGCACTCCTTGCAGCCATAGCAGATGCAGCCAAGGGTCCCAGTGAAGGATATTTGATGCAAGGCATCAAAAACCTTGGAGGTCCCCAGATTAATCTCGAGGGTGGAAATTACTTGATCAGCCAACCACTGCGGTTGCCGGTGGCTGGAGTGGGGAACCTTATGATACATGGGGGGACTATAAGAGCCTCAGATGGTTTTCCAGCAGATAGCTATATCATTGATTTGTCACCCTTTTCCAATGAAGGAAACCGAGAGAGTTCTTCAACATCCTACAATTTTGAGTACATAACTTTCAAAGACCTCTTGCTGGACTCAAACTTCAGGGGTGGAGGCATTTCAGTCATAAACTCACTTCGGATTAGCATAGACAATTGCTACATCACACATTTCACCACCAATGGAATTTTAGTCCAAGGTGGCCATGAAACCTACATCAGAAACACTTTCCTTGGTCAGCATATAACTGCTGGTGGGGACAAAAATGAAAAAGACTTCTCAGGGACAGGAATAAACCTCCAGGGTAATGACAATGCTGTCACAGATGTTGTAATTTACTCTGCTGCTATAGGAATAATGGTTACTGGTCAAGCCAATGCTTTTTCTGGTGTACATTGTTACAACAAGGCCACTGGCTTTGGAGGCACAGGGATTTATTTGAAAGTACCAGGTTTGACACAAACAAAGATTGTGAATTCTTACATGGATTTCACCAATATTGTGGCTGAAGACCCGGTTCAATTCCATGTCTCTAGTTGTTTCTTCCTTGGTGATGCCAACATTGTCCTAAAGTCTAAGAATGGGGTTATAAATGGTGTTGATATTGTTGATAACATGTTCTCAGGTTCAGATGATGGGGTTGAAATTGTTGAGCTGGACCAATCCAACAATCCTTTCCATCAAATTGAACAAGTCATTGTTGACAGAAACAATGCAAGAGGGATGAAGTTAAAGGCCACAGTTGCAAAAGGGTCCATGCAAGGGAATGGAACCTCATGGACTGTTGATTTTAACAATGTTTTGCTTTTTCCTAACCTTATAAAACATGTTCAGTACTCTGTAAGCACCCCTGGCAGCACCTTCCCAAATCATATTCTGAGGAATGTGTCTGAGAATCGTGTTGTGATTGAAACAAACAAAGCAGTGCCTGCCAGTGTTTTTGTTTCTGTGGATCAAAGTGAGGCAAGTTGA 1527 0.4316 MTTMARTCFTCSLLLGMACSIVIGAYEESLYPRKISRGNYHEAIQRLQSFKASLTTRDSIASAPSSLSPFSSPPAPAPAPSPSPLSLQGVNYPRVYHVTSYGADPTGSSDSTEALLAAIADAAKGPSEGYLMQGIKNLGGPQINLEGGNYLISQPLRLPVAGVGNLMIHGGTIRASDGFPADSYIIDLSPFSNEGNRESSSTSYNFEYITFKDLLLDSNFRGGGISVINSLRISIDNCYITHFTTNGILVQGGHETYIRNTFLGQHITAGGDKNEKDFSGTGINLQGNDNAVTDVVIYSAAIGIMVTGQANAFSGVHCYNKATGFGGTGIYLKVPGLTQTKIVNSYMDFTNIVAEDPVQFHVSSCFFLGDANIVLKSKNGVINGVDIVDNMFSGSDDGVEIVELDQSNNPFHQIEQVIVDRNNARGMKLKATVAKGSMQGNGTSWTVDFNNVLLFPNLIKHVQYSVSTPGSTFPNHILRNVSENRVVIETNKAVPASVFVSVDQSEAS* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2510 508 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Pvu9g2510 508 SUPERFAMILY Pectin lyase-like 94 464 IPR011050 -
Pvu9g2510 508 Pfam Pectate lyase superfamily protein 98 324 IPR024535 -
Pvu9g2510 508 MobiDBLite consensus disorder prediction 69 83 - -
Pvu9g2510 508 SMART pbh1 163 229 IPR006626 -
Pvu9g2510 508 SMART pbh1 230 252 IPR006626 -
Pvu9g2510 508 SMART pbh1 287 308 IPR006626 -
Pvu9g2510 508 SMART pbh1 377 403 IPR006626 -
Pvu9g2510 508 PANTHER POLYGALACTURONASE QRT3-LIKE PROTEIN 4 508 - -
Pvu9g2510 508 MobiDBLite consensus disorder prediction 63 84 - -
Pvu9g2510 508 Gene3D - 95 504 IPR012334 -
Pvu9g2510 508 PANTHER POLYGALACTURONASE QRT3 4 508 IPR039279 GO:0004650
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2510 Pvu-Chr9 35613938 35616600 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2510 9 35613938 35616600 Pvu9g2510 9 35613938 35616600 ECH