Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2508 ATGAGATGCTCAATCTTGGTCTTTCTCTTACCACTGATAATAGCACAAGAAGTCACATGCTTCAACAAACATGCACCACCATTGTCCCATTTCAGGAACAAATTTAAGGATAGAATGGCCATGGCCATGGCCATATCATCCCAGCCACCCTCTCCATCTCCATCTACCAAGATGAGTGGGAGAGTGGTGTATCCAGCTGAGTATGGTGCAGACCCCACAGGGGCACATGAGAGCAGTGATTCAATTGAGAAAGCTGTTGAAGATGCTTTTGGGATTGAGAGTGAAGGTGAGTTGGTGGGAGGAGTTAGAGACCTTGGAGGGGTTGTGATTGATCTGCAAGGTGGAAACTACACAATCAGCAAACCCATCAAATTTCCTTCTTCTGGGGGTGGCAATCTTGTGGTAAAAGGAGGAACATTGAGAGCTTCTGATTCATTTCCCACTGATAGGCATCTTGTTGAGTTATGGGCATCTAATTCCCAAAACCTTCCAAGAACATCACTTTTCAACAGCATGAAACTTCAGCAACCTAATGGTATTTACTATGAAGACATAACATTCAGAGACATTCTCTTTGATTCTGGCCACAGGGGTGGAGGGATATTCATTGCTGATTCTGTGAGAACAAGGATCAACAACTGCTTCTTCCTGCACTTCACAACAGAAGGGATTCTGGTTGAAGGTGGCCATGACACCTTCATATCAAACACTTTTCTTGGACAACACTCAACAGTTGGTGGAGACAAAGGGGAGAGGAATTTCTCTGGCACAGCCATTGATCTTGCCAGCAATGACAATGCAATCACAGATGTTGCAATTTTCTCTGCAGCCATAGGAGTTCTCCTGAGGGGCCAGGCCAACATACTCACAGGGGTGCATTGCTATAACAAGGCCACAGGTTTTGGTGGCATTGGCATTTTGGTGAAACTAGCAGGGAATTCACAAACTAGAATTGATAATTGTTACATGGACTATACAGCAATAGTGATGGAAGATCCAGTTCAAGTTCATGTCACTAATGGATTTTTCTTAGGAGATGCTAACATAGTTTTGAAGTCAGTTGAAGGAAAAATTTGTGGTTTGAATATAGTTGACAATATGTTCAGTGGGAACCCCAATAACAAGGTTCCAATTGTAAGTCTAGATGGGGAATTCAGTAACATTGATCAAGTGATAACTGATAGGAACAGTGTGATTGGTATGAGTCTGAGATCAACTGTTGGGAAGTTAATTGTGGGAGGAAATGGCACAAAGTGGGTGGCTGATTTTTCAAACGTTTTGCTATTTCCCAATAGGATTAGTCACTTCCAGTACTCATTTTATGCTGAAGGGGAGACCAAGTTTTTGGCACATTCTGTGACCAATGTGACTAACAATGTTGTAGTTGTGGAAAGTGAGAAACCAGCTCAAGGGGTTGTTTCCTTCTTGGTTGAACAGTGA 1440 0.4278 MRCSILVFLLPLIIAQEVTCFNKHAPPLSHFRNKFKDRMAMAMAISSQPPSPSPSTKMSGRVVYPAEYGADPTGAHESSDSIEKAVEDAFGIESEGELVGGVRDLGGVVIDLQGGNYTISKPIKFPSSGGGNLVVKGGTLRASDSFPTDRHLVELWASNSQNLPRTSLFNSMKLQQPNGIYYEDITFRDILFDSGHRGGGIFIADSVRTRINNCFFLHFTTEGILVEGGHDTFISNTFLGQHSTVGGDKGERNFSGTAIDLASNDNAITDVAIFSAAIGVLLRGQANILTGVHCYNKATGFGGIGILVKLAGNSQTRIDNCYMDYTAIVMEDPVQVHVTNGFFLGDANIVLKSVEGKICGLNIVDNMFSGNPNNKVPIVSLDGEFSNIDQVITDRNSVIGMSLRSTVGKLIVGGNGTKWVADFSNVLLFPNRISHFQYSFYAEGETKFLAHSVTNVTNNVVVVESEKPAQGVVSFLVEQ* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2508 479 Gene3D - 66 472 IPR012334 -
Pvu9g2508 479 SUPERFAMILY Pectin lyase-like 64 417 IPR011050 -
Pvu9g2508 479 PANTHER POLYGALACTURONASE QRT3-LIKE PROTEIN 1 479 - -
Pvu9g2508 479 PANTHER POLYGALACTURONASE QRT3 1 479 IPR039279 GO:0004650
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2508 Pvu-Chr9 35600954 35604007 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2508 9 35600954 35604007 Pvu9g2508 9 35600954 35604007 ECH