Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2500 ATGGCGCCGGGAGTCGGAGGCCTGCAGCTCACTTCCCTTGCCGCCGCCGCCGCCTCTGATTCCGATGACCTCGAGGATGTGCGGCTCTTGGACTCCTACGACGAAATCGATGCCGGAGCCAGGCGGATTCAGGTGACGGTCACCGGCATGACCTGCGCCGCCTGCTCCAATTCCGTCGAATCAGCTCTCAAATCACTCGACGGAGTTATCAGCGCCTCCGTCGCACTGCTTCAGAACAAAGCCGACGTAGTTTTCAACTCGGCTCTGCTCAAGGATGAAGACATTAAAAATGCAATTGAAGATGCTGGGTTTGAAGCAGACATATTACCTGAATCTAGTACCGTTGGAAAGATGCCACATGGAACCTTGGTGGGACAGTTCACAATTGGAGGTATGACATGTGCAGCATGTGTAAATTCAGTTGAAGGCATTTTAAGAAAGCTTCCAGGGGTCAAGAGGGCGGTGGTAGCTTTGGCTACTTCGTCAGGTGAAGTTGAATATGATTCCAGTGTAATTAGTAAAGATGATATAGTCAACGCGATTGAAGATTCCGGCTTTGATGCTTCATTTTTACAAAGCAATGAACAGGATAAAATAATTTTAGGGGTGGTTGGTGTGTACAGTGTGATTGATGGACAAGTTTTAGAGGGCATTATTAGCAGCATAAAAGGAGTCAGGCAGTTTCATTTTGACCAGATTTCAGGTGAATTGGATGTTCTGTTTGATCCTGAAGTTCTTAGTTCTAGATCCTTAGTTGATGCAATCCAGGGGGGAAGCAATGGGAAGTTCAAATTACATGTTAGAAGCCCTCATATGAGAATGACTTCTAAAGGCGCTGAAGAGATTTCAACTATATTTCGGCGCTTTATCTCCAGTCTGTTTCTTAGTATTCCTCTCTTCTTCGTGAGGGTAGTTTGTCCTCATATACCATTCATGTATTCCCTGTTACTTCGGCGATGTGGGCCTTTCCTCATGAGTGATTGGTTGAAATGGGCATTGGTGAGTCTGATCCAATTTGTGATCGGTAAGTGCTTCTATATTGCAGCTGGCAGAGCTCTTAGAAATGGTTCCACAAACATGGATGTCCTGGTTGCAGTGGGAACTACCGCTTCTTATGTTTATTCTGTTTGTGCTCTTCTATATGGTGCTCTTACTGGATTTTGGTCTCCAACTTACTTTGAAACAAGTGCTATGCTCATAACATTTGTATTGTTGGGCAAGTATTTGGAGTGCCTTGCCAAGGGAAAGACATCTGATGCTATCAAGAAATTAGTAGAACTTGCTCCTGCAACAGCTTTACTAGTTGTCAAAGATAAAGGTGGTAAATGTATTGAAGAAAGGGAAATTGATTGTTTGCTTGTTCAACCTGGGGACACATTGAAAGTTCTTCCTGGTGCAAAGATCCCTACCGATGGTATTGTTACTTGGGGCTCAAGTTATGTAAATGAAAGCATGGTAACTGGTGAATCTGTACCTATTTTGAAGGAGGTGAATGCTCCTGTTATTGGAGGCACAATAAATTTTCATGGTGTCCTTCATGTTCGAGCTTCCAAAGTAGGATCTGATACAGTTTTGAGCCAGATTATTAGTTTGGTTGAGACAGCGCAGATGTCCAAAGCTCCTATTCAGAAGTTTGCTGATTATGTGGCAAGCATATTTGTTCCTTTGGTCGTTTCTTTGGCATTATTGACATTATTATGCTGGTACATTGCTGGGGCTATTGGAGCTTACCCAGAAGAGTGGCTGCCAGAAAATGGGAATCACTTTGTTTTTGCCCTGATGTTCTCAATATCTGTAGTAGTGATTGCATGTCCCTGTGCCGTTGGCTTGGCAACACCAACAGCTGTGATGGTGGCAACAGGGGTTGGGGCTAACAATGGAGTGTTAATTAAAGGTGGAGATGCACTGGAAAGGGCCCAGAGGGTTAAGTATGTGATATTTGATAAAACAGGCACTCTGACTCAGGGAAAAGCTACTGTTACTACTGCCAAGACTTTCACAGGAATGGAACGTGGAGAATTTCTTAAATTGGTGGCTTCTGCTGAGGCTAGCAGTGAACACCCACTAGCAAATGCAATATTAGCATATGCACGCCATTTTCATTTCTTTGATGACTCGTCTGCTGATACCGGTACCGAGAATGATGCGAAAACTGGTTGGCTTTTTGATGTCTCAGACTTCTCTGCTCTTCCTGGAAAAGGCGTTCAATGTTTCATAGATGGAAAGCTTATTTTGGTTGGTAACAGGAAGTTGATGGCGGAAAATGGCATACATATTTCAACAGAGGTGGAAAATTTTGTGGTAGAGCTCGAAGAAAGTGCTAAGACAGGGATACTGGTAGCATATAACGATATATTAACTGGAGTCTTGGGGATTGCGGACCCACTAAAGAGAGAAGCTTCTGTAGTCATAGAGGGTCTCCAGAAAATGGGTGTCACACCTGTTATGGTTACAGGAGATAACTGGAGAACAGCTCGTGCTGTTGCTAAGGAGGTTAACATATCAGATGTTAGGGCAGAGGTCATGCCAGCAGGAAAAGCTGATGTTGTTCGTTCATTCCAAAAAGATGGAAGCATAGTTGCAATGGTGGGTGATGGCATCAATGATTCTCCTGCATTAGCTGCAGCTGATGTTGGTATGGCTATCGGAGCTGGAACTGATATTGCAATTGAAGCCGCAGACTATGTGCTGATGAGAAATAACTTAGAAGATGTGATCACAGCCATTGATCTTTCCCGGAAGACCTTCTCTCGAATTCGATTGAATTATGTATTTGCAATGGCTTACAATGTTGTGGCCATACCAGTTGCCGCTGGTGTTTTCTACCCTTCACTGAGGATCAAGCTACCACCGTGGGTTGCTGGTGCCTGCATGGCTCTCTCTTCTGTAAGTGTTGTATGCTCTTCTTTGCTTCTTAAAAGATATAGAAGACCCAGACTTACTGCAATACTTGAAATAGTTGTAGAATAG 2970 0.4397 MAPGVGGLQLTSLAAAAASDSDDLEDVRLLDSYDEIDAGARRIQVTVTGMTCAACSNSVESALKSLDGVISASVALLQNKADVVFNSALLKDEDIKNAIEDAGFEADILPESSTVGKMPHGTLVGQFTIGGMTCAACVNSVEGILRKLPGVKRAVVALATSSGEVEYDSSVISKDDIVNAIEDSGFDASFLQSNEQDKIILGVVGVYSVIDGQVLEGIISSIKGVRQFHFDQISGELDVLFDPEVLSSRSLVDAIQGGSNGKFKLHVRSPHMRMTSKGAEEISTIFRRFISSLFLSIPLFFVRVVCPHIPFMYSLLLRRCGPFLMSDWLKWALVSLIQFVIGKCFYIAAGRALRNGSTNMDVLVAVGTTASYVYSVCALLYGALTGFWSPTYFETSAMLITFVLLGKYLECLAKGKTSDAIKKLVELAPATALLVVKDKGGKCIEEREIDCLLVQPGDTLKVLPGAKIPTDGIVTWGSSYVNESMVTGESVPILKEVNAPVIGGTINFHGVLHVRASKVGSDTVLSQIISLVETAQMSKAPIQKFADYVASIFVPLVVSLALLTLLCWYIAGAIGAYPEEWLPENGNHFVFALMFSISVVVIACPCAVGLATPTAVMVATGVGANNGVLIKGGDALERAQRVKYVIFDKTGTLTQGKATVTTAKTFTGMERGEFLKLVASAEASSEHPLANAILAYARHFHFFDDSSADTGTENDAKTGWLFDVSDFSALPGKGVQCFIDGKLILVGNRKLMAENGIHISTEVENFVVELEESAKTGILVAYNDILTGVLGIADPLKREASVVIEGLQKMGVTPVMVTGDNWRTARAVAKEVNISDVRAEVMPAGKADVVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIAIEAADYVLMRNNLEDVITAIDLSRKTFSRIRLNYVFAMAYNVVAIPVAAGVFYPSLRIKLPPWVAGACMALSSVSVVCSSLLLKRYRRPRLTAILEIVVE* 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2500 989 Gene3D - 653 742 IPR023299 GO:0000166
Pvu9g2500 989 Gene3D - 743 794 IPR023299 GO:0000166
Pvu9g2500 989 PRINTS H+-transporting ATPase (proton pump) signature 835 851 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Pvu9g2500 989 PRINTS H+-transporting ATPase (proton pump) signature 863 879 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Pvu9g2500 989 PRINTS H+-transporting ATPase (proton pump) signature 894 919 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Pvu9g2500 989 ProSiteProfiles Heavy-metal-associated domain profile. 124 190 IPR006121 GO:0046872
Pvu9g2500 989 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 360 972 IPR027256 GO:0006812|GO:0016021|GO:0019829
Pvu9g2500 989 CDD HMA 126 189 IPR006121 GO:0046872
Pvu9g2500 989 SUPERFAMILY HMA, heavy metal-associated domain 39 110 IPR036163 GO:0046872
Pvu9g2500 989 SUPERFAMILY HMA, heavy metal-associated domain 120 195 IPR036163 GO:0046872
Pvu9g2500 989 Pfam Heavy-metal-associated domain 127 187 IPR006121 GO:0046872
Pvu9g2500 989 Pfam Heavy-metal-associated domain 45 105 IPR006121 GO:0046872
Pvu9g2500 989 Gene3D - 125 190 - -
Pvu9g2500 989 CDD HMA 44 106 IPR006121 GO:0046872
Pvu9g2500 989 ProSitePatterns E1-E2 ATPases phosphorylation site. 648 654 IPR018303 -
Pvu9g2500 989 Gene3D - 414 536 - -
Pvu9g2500 989 Gene3D - 613 920 IPR023214 -
Pvu9g2500 989 SFLD p-type atpase 628 915 IPR044492 -
Pvu9g2500 989 ProSitePatterns Heavy-metal-associated domain. 47 77 IPR017969 GO:0046872
Pvu9g2500 989 PANTHER HEAVY METAL P-TYPE ATPASE 12 982 - -
Pvu9g2500 989 SUPERFAMILY Calcium ATPase, transmembrane domain M 380 937 IPR023298 -
Pvu9g2500 989 SUPERFAMILY Calcium ATPase, transduction domain A 447 532 IPR008250 -
Pvu9g2500 989 SUPERFAMILY HAD-like 645 969 IPR036412 -
Pvu9g2500 989 SFLD Haloacid Dehalogenase 628 915 - -
Pvu9g2500 989 ProSitePatterns Heavy-metal-associated domain. 129 158 IPR017969 GO:0046872
Pvu9g2500 989 Pfam E1-E2 ATPase 429 625 - -
Pvu9g2500 989 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 399 667 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Pvu9g2500 989 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 733 944 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Pvu9g2500 989 Pfam haloacid dehalogenase-like hydrolase 642 877 - -
Pvu9g2500 989 CDD P-type_ATPase_Cu-like 287 959 - -
Pvu9g2500 989 TIGRFAM TIGR00003: copper ion binding protein 126 188 IPR006122 GO:0005507
Pvu9g2500 989 TIGRFAM TIGR00003: copper ion binding protein 43 106 IPR006122 GO:0005507
Pvu9g2500 989 Gene3D - 40 111 - -
Pvu9g2500 989 ProSiteProfiles Heavy-metal-associated domain profile. 42 108 IPR006121 GO:0046872
Pvu9g2500 989 PANTHER ATP7, ISOFORM B 12 982 - -
Pvu9g2500 989 PRINTS P-type cation-transporting ATPase superfamily signature 482 496 - -
Pvu9g2500 989 PRINTS P-type cation-transporting ATPase superfamily signature 646 660 - -
Pvu9g2500 989 PRINTS P-type cation-transporting ATPase superfamily signature 788 799 - -
Pvu9g2500 989 PRINTS P-type cation-transporting ATPase superfamily signature 810 820 - -
Pvu9g2500 989 PRINTS P-type cation-transporting ATPase superfamily signature 863 882 - -
Pvu9g2500 989 PRINTS P-type cation-transporting ATPase superfamily signature 886 898 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2500 Pvu-Chr9 35544426 35551889 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2500 9 35544426 35551889 Pvu9g2500 9 35544426 35551889 ECH