Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2080 ATGGGTGGTAGTAACAGAAGGAAGAGGCGTCATTTCAGCAGAATCCATTCATTCTCTTGTGGCAAAGCTTCATTCAAAGGGGAGCATTCACTTATAGGGGGTCCTGGATTCTCAAGGATAGTGTACTGCAACGAGGCAGAACGAGGGGAGGGAAGTTTTGTGAGTTACGGTGACAATTATGTGAGTACTACTAAGTATACAGTGGCTACTTTCCTACCCAAGTCCTTGTTTGAGCAATTCAGGAGGGTTGCCAATTTTTACTTCCTTGTCTGTGCAATTCTGTCTTTTTTCCCGGTTTCTCCTTATTCGGCTGTCAGCAATGTTATTCCTCTTGTTGCTGTGGTTGCAGCTACAATGGGGAAAGAGGCTGTGGAGGATTGGAGGAGGAAAAAGCAGGATATACATATGAATAATAGAAAGGTTAAAATGCACCATGGAGATGGTGTTTTTGACTATTCTAAATGGAAGGATTTGAAAGTTGGAGACATAGTAAAGGTTGAAAAGGATGAATTTTTCCCTGCTGATTTAATCTTACTTTCATCAAGCTATGATGATGCAATTTGCTATGTTGAGACCATGAATCTTGATGGAGAAACAAATCTAAAACTTAAACAAGCACTGGAAGAAACATCAAAGTTGCAAGAAGACTCGAGCTATCAAAATTTCAAGGTTATCATCAAATGCGAAGATCCAAATGCAAATTTGTACTCCTTTGTAGGGAATTTGGAGCTTGAAAATCAATTGCATCCTCTTGCACCTCAGCAGGTGCTGCTTAGGGACTCAAAGCTAAGAAACACTGAGTTTATCTATGGTGTGGTAATTTTTACAGGCCATGATACAAAGGTTATGCAGAATTCAACAGAACCTCCTTCCAAGAGAAGCACAGTTGAGAAACGGATGGATAAAATCATTTACTTTTTGTTCGTTGTCTTATTTTTAATATCTTTCGTTGGTTCAATTTTTTTCGGGATTGCAACTAGGGAAGACCTTGAAAATGGAGTTATGAAGCGATGGTACCTCAGACCAGATGATACGACAATTTACTTTGATCCAAAGAAAGCACCAGTTGCAGCAATGCTGCAATTCTTGACTGCACTCATGTTGTACAGTTACTTGATTCCAATTTCTTTGTACGTTTCCATTGAAATTGTAAAGGTTCTTCAAAGCATTTTCATCAACCAGGATTTGCATATGTATTACGAGGAAACTGACAGGCCAGCTCATGCTCGTACCTCAAATTTGAATGAAGAACTTGGTCAAGTTGATACTATACTTTCAGATAAAACCGGAACTTTGACTTGCAACTCTATGGAATTTGTCAAGTGTTCTATTGCTGGGATTGCCTATGGCCAAGGAGTTACAGAAGTTGAGAGAGCTCTAGCCAAGCGAAAAGGATTACCTATAGGTGAAGAGTTGGCAGAAGATGGTTATGTTCCAAAGACTTCTGAAGTAAAGTCTTCCATTAAAGGTTTTAGCTTTATGGATGAAAGGATCACAAATGGAAATTGGATCAATGAACCTCACGCCAATGTAATCCATAGGTTCCTGCAGTTGTTGGCAGTATGCCATACTGCAATACCTGAAGTTGATGAAGAAAATGGTAGAATTTCATATGAAGCTGAGTCACCTGATGAGGCAGCTTTTGTGGTTGCAGCCAGAGAACTTGGGTTTGGGTTTTATGAAAGGACACAGACAACTATCTCACTGCATGAGTTCAATCCCAAATCAGGAAAAACAACTGAAAGGTCCTACAAACTTTTGAATATGCTAGAGTTTAGCAGTACAAGAAAGCGGATGTCTGTAATTGTAAGAGATGAAGAGGGGAAATTGCTACTATTTAGCAAAGGAGCAGACAGTGTCATGTTCGAACGACTTGGAAGTAATGGAAGAGAGTTTGAAGAGAAGACTAAGCAGCACATTGATGAATATGCGGAAGCCGGTTTGAGGACCTTGATACTTGCATATCGGGAACTTGATGAAGAAGAGTACAATATATTCAATAAAGAATTTATGGAGGCCAACAACTTAGTAAGTGCAGATAGGGAGCAAATTGTGGAGGAAATATCAGAAATGATTGAGAAGGAGTTAATTCTTCTTGGTGCAACTGCGGTTGAAGACAAACTTCAAAATGGGGTTCCTGAATGCATCGACAAGCTAGCTCAGGCAGGAATTAAACTATGGGTTCTGACTGGTGATAAAATGGAGACGGCAATCAATGTTGGGTTTGCATGTAGTTTGCTCAGACAAGGAATGAAGCAAATTATAATCAGTTCAGACACTCCAGAAATCAAGTCATTGGAGAAAGTGGAGGACAAGTCTGCTGCAGCAGAGGCAATCAAGGCAAGTGTTATTCTTCAACTAAGGAAAGGAAAGGAATTACTTGCTGAATATGATGAAAACTCCGAGGCATTAGCTCTCATCATTGATGGGAAGTCTCTTACTTATGCACTAGAAGATGATGTGAAGGACTTATTTCTTGCACTTGCTGTTGGCTGTGCATCTGTCATATGCTGTCGTTCATCTCCCAAGCAGAAAGCACTAGTTACTAGACTGGTAAAGATTAAAACTGGTAGTACAACTCTAGCAATTGGTGATGGAGCAAATGATGTTGGAATGCTTCAAGAAGCAGACATTGGGATTGGTATAAACGGTGTCGAAGGAATGCAGGCAGTTATGTCAAGTGATATTGCCATTGCCCAATTTCGGTTTCTAGAGCGTTTACTTCTTGTGCATGGACATTGGTGTTACAGAAGAATCTCATCAATGATCTGCTACTTCTTTTACAAGAACATTACCTTTGGCTTCACCCTCTTCTTCTATGAGATCTACGCCTCGTTCTCAGGGCAAGCTGCATACAATGACTGGTACCTCTCACTATATAACGTATTCTTCACTTCCCTTCCAGTAATTGCCTTAGGAGTATTTGACCAGGATGTCTCTGCTAGATTATGTCTCAAGTTCCCATTATTATATCAAGAAGGTGTGCAAAATGTCCTCTTCAGCTGGAAACGGATCCTGGGTTGGGCATCTAATGGAGTATTGAGTGCTAGCGTAATATTTTTCTTCTGCATCAACGCAATGGAGAATCAAGCATTCCGCAAAGAAGGGGAAGTTGCTGACCTGGAAGTTCTTGGTGCAACCATGTACACTTGTGTGGTGTGGGTGGTGAATTCCCAAATGGCACTATCCATCAGTTATTTCACTTACATTCAACATTTGTTCATATGGGGTGGCATTATTTTCTGGTACATATTCCTCATAGTGTATGGAACAATGGATCCCACTGTATCAACCACTGCCTATAAGGTCTTCATTGAAGCATGTGCACCAGCACCATCATACTGGCTCCTCACTTTGCTTGTGCTTGTTGCTTCACTCCTTCCATACTTCGCCTATGCTTCAATCCAAATGAGGTTCTTCCCCATGTTCCATCAGATGATACAATGGATTCGAAATGATAAACAAACAACTGACCCAGAATACGTTCATGTCGTGAGACAGAGATCCATAAGACACACAACAGTTGGCTTCACGGCTCGTTTTGAAACATCCCAAAGTTCGGGAGCATCAAAGAGCATTCAAGTTTGA 3588 0.4066 MGGSNRRKRRHFSRIHSFSCGKASFKGEHSLIGGPGFSRIVYCNEAERGEGSFVSYGDNYVSTTKYTVATFLPKSLFEQFRRVANFYFLVCAILSFFPVSPYSAVSNVIPLVAVVAATMGKEAVEDWRRKKQDIHMNNRKVKMHHGDGVFDYSKWKDLKVGDIVKVEKDEFFPADLILLSSSYDDAICYVETMNLDGETNLKLKQALEETSKLQEDSSYQNFKVIIKCEDPNANLYSFVGNLELENQLHPLAPQQVLLRDSKLRNTEFIYGVVIFTGHDTKVMQNSTEPPSKRSTVEKRMDKIIYFLFVVLFLISFVGSIFFGIATREDLENGVMKRWYLRPDDTTIYFDPKKAPVAAMLQFLTALMLYSYLIPISLYVSIEIVKVLQSIFINQDLHMYYEETDRPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSIAGIAYGQGVTEVERALAKRKGLPIGEELAEDGYVPKTSEVKSSIKGFSFMDERITNGNWINEPHANVIHRFLQLLAVCHTAIPEVDEENGRISYEAESPDEAAFVVAARELGFGFYERTQTTISLHEFNPKSGKTTERSYKLLNMLEFSSTRKRMSVIVRDEEGKLLLFSKGADSVMFERLGSNGREFEEKTKQHIDEYAEAGLRTLILAYRELDEEEYNIFNKEFMEANNLVSADREQIVEEISEMIEKELILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINVGFACSLLRQGMKQIIISSDTPEIKSLEKVEDKSAAAEAIKASVILQLRKGKELLAEYDENSEALALIIDGKSLTYALEDDVKDLFLALAVGCASVICCRSSPKQKALVTRLVKIKTGSTTLAIGDGANDVGMLQEADIGIGINGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNITFGFTLFFYEIYASFSGQAAYNDWYLSLYNVFFTSLPVIALGVFDQDVSARLCLKFPLLYQEGVQNVLFSWKRILGWASNGVLSASVIFFFCINAMENQAFRKEGEVADLEVLGATMYTCVVWVVNSQMALSISYFTYIQHLFIWGGIIFWYIFLIVYGTMDPTVSTTAYKVFIEACAPAPSYWLLTLLVLVASLLPYFAYASIQMRFFPMFHQMIQWIRNDKQTTDPEYVHVVRQRSIRHTTVGFTARFETSQSSGASKSIQV* 1196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2080 1195 SUPERFAMILY HAD-like 420 918 IPR036412 -
Pvu9g2080 1195 Pfam Phospholipid-translocating ATPase N-terminal 41 106 IPR032631 -
Pvu9g2080 1195 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 827 946 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Pvu9g2080 1195 Pfam Cation transport ATPase (P-type) 530 625 - -
Pvu9g2080 1195 CDD P-type_ATPase_APLT_Dnf-like 58 1023 - -
Pvu9g2080 1195 SUPERFAMILY Calcium ATPase, transduction domain A 145 285 IPR008250 -
Pvu9g2080 1195 Pfam Phospholipid-translocating P-type ATPase C-terminal 891 1141 IPR032630 -
Pvu9g2080 1195 SFLD p-type atpase 407 914 IPR044492 -
Pvu9g2080 1195 Gene3D - 541 678 IPR023299 GO:0000166
Pvu9g2080 1195 Gene3D - 695 903 IPR023214 -
Pvu9g2080 1195 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 56 1148 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Pvu9g2080 1195 PRINTS P-type cation-transporting ATPase superfamily signature 425 439 - -
Pvu9g2080 1195 PRINTS P-type cation-transporting ATPase superfamily signature 749 759 - -
Pvu9g2080 1195 PRINTS P-type cation-transporting ATPase superfamily signature 863 882 - -
Pvu9g2080 1195 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 4 1186 - -
Pvu9g2080 1195 SFLD C1.7: P-type atpase like 407 914 - -
Pvu9g2080 1195 ProSitePatterns E1-E2 ATPases phosphorylation site. 427 433 IPR018303 -
Pvu9g2080 1195 SUPERFAMILY Calcium ATPase, transmembrane domain M 55 1141 IPR023298 -
Pvu9g2080 1195 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 498 670 IPR023299 GO:0000166
Pvu9g2080 1195 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 4 1186 - -
Pvu9g2080 1195 Gene3D - 114 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2080 Pvu-Chr9 29853066 29859164 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2080 11 1187 Primary Pumps ATPases AT1G68710 68.683 0.0 1766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2080 9 29853066 29859164 Pvu9g2080 9 29853066 29859164 ECH