Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2061 ATGGCATCTCAAGCAGAATCTAGCATGGATTACAAGCCCTACAGCTACTCCACACTGCTGAAATCCTTTGCAGACCAAACTGATCAGACCTACAAGCTCGAAGACTTTCTTTCTCGCTTAGAGGAAGAACGTCTCAAGATTGATGCCTTCAAGCGTGAGCTTCCTCTCTGCATGCAACTCCTCACCAACGCTGTGGAGGCTTCAAGGCAGCAACTACAGGCCTTCCGATCAAACCAAGGCACAAGGCCAGTTCTGGAAGAATTCATACCCATAAAGCATCCAAACTCTCAAGAAAGCACTGAGAAGGCATCAAACCTATCAGACAAGGCGAATTGGATGACATCAGCCCAATTATGGAGCCAAGCAAGCGAAGGAACCAAACCAAAATCCACAATTACATCACCAAAAGAAAGTGCTGATACAGGGTTTAGCGTGAGCCCTAAGCTAGCCTTAGACAACAAACATAGGAATGGAGGAGCCTTTTTACCATTCTCAAGAGAGCGAAACTCATGCCAAGGAGTAGGGGGACTTCCTGAGTTAGCCCTTGCCTCTTCTGAGAATGAAATGGAGGTGAAGAACTGTGAAGATGCAGAGAAATGTTCCAAAAGGGACAATTCAGGCAAAGGAGGGAATTGTGAAGGAATTGTTGATCAGGGAAAAAGTGCTGCAACTGAGTCACAAACAACTCATACTACAACCACCACAACTAACACTACTGGCCAAACTCATAGGAAAGCAAGAAGGTGTTGGTCACCGGACTTGCACCGTCGATTTGTTAATGCTCTTCAAATGCTTGGTGGATCTCAAGTGGCCACTCCAAAACAGATCAGGGAGTTGATGAAGGTTGACGGTTTGACCAATGATGAAGTTAAAAGCCATCTCCAGAAATATAGGCTTCACACTAGAAGACCCAGCCCAAGCCTACATGCAGGAGCACCAACACCACAACTTGTAGTGCTGGGAGGAATTTGGGTGCCACCGGAATATGCCACTGCTACGGCACACTCTGGTGGCCCCAGCCTCTATGGCCCACATCCTACCTCACATATGCCACCGCCACACTACTGTGCAGGCACCCCTGTGTCACAAGAGTTCTACAACTTAGCTCCATCACTATCGTTGCCACCACCACAAGACCACACTCTCCATCACCATTTTCACATGTACAAGACTGCACCACAGACCCAAAGTTCTTCAGAATCAGATGTTCGGAGCGGTGGCGGACGATCTGAGAGCATTGAGGATGGGAAGTCGGAGAGTGGTAGCTGGAAAGGAGAGAATGGAGAGAGGAAAGGGTTGGCAGCACTAAGAGATCAAGAAGGGGAAGACAGCACTGGGAGTGAGATCACTCTTAGATTCTAG 1362 0.4802 MASQAESSMDYKPYSYSTLLKSFADQTDQTYKLEDFLSRLEEERLKIDAFKRELPLCMQLLTNAVEASRQQLQAFRSNQGTRPVLEEFIPIKHPNSQESTEKASNLSDKANWMTSAQLWSQASEGTKPKSTITSPKESADTGFSVSPKLALDNKHRNGGAFLPFSRERNSCQGVGGLPELALASSENEMEVKNCEDAEKCSKRDNSGKGGNCEGIVDQGKSAATESQTTHTTTTTTNTTGQTHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPSPSLHAGAPTPQLVVLGGIWVPPEYATATAHSGGPSLYGPHPTSHMPPPHYCAGTPVSQEFYNLAPSLSLPPPQDHTLHHHFHMYKTAPQTQSSSESDVRSGGGRSESIEDGKSESGSWKGENGERKGLAALRDQEGEDSTGSEITLRF* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2061 453 MobiDBLite consensus disorder prediction 390 453 - -
Pvu9g2061 453 MobiDBLite consensus disorder prediction 390 406 - -
Pvu9g2061 453 Coils Coil 33 53 - -
Pvu9g2061 453 MobiDBLite consensus disorder prediction 120 141 - -
Pvu9g2061 453 MobiDBLite consensus disorder prediction 220 245 - -
Pvu9g2061 453 MobiDBLite consensus disorder prediction 200 247 - -
Pvu9g2061 453 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 453 IPR044787 GO:0003700|GO:0006355
Pvu9g2061 453 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 242 302 IPR017930 -
Pvu9g2061 453 MobiDBLite consensus disorder prediction 407 447 - -
Pvu9g2061 453 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 245 300 IPR006447 GO:0003677
Pvu9g2061 453 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 1 453 - -
Pvu9g2061 453 Pfam Myb-like DNA-binding domain 247 298 IPR001005 -
Pvu9g2061 453 Coils Coil 58 78 - -
Pvu9g2061 453 SUPERFAMILY Homeodomain-like 242 303 IPR009057 -
Pvu9g2061 453 MobiDBLite consensus disorder prediction 120 143 - -
Pvu9g2061 453 Gene3D - 244 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2061 Pvu-Chr9 29585950 29588825 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2061 1 453 G2-like Transcription Factor Family AT2G03500 52.101 1.09e-130 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pvu9g2061 Myb_DNA-binding 9.8e-06 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2061 9 29585950 29588825 Pvu9g2061 9 29585950 29588825 ECH
Pvu3g1657 3 36679993 36682850 Pvu9g2061 9 29585950 29588825 PCT