Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2054 ATGGAAGAGACAAAAGCAGACACACCGTTGATGCCACCATCATCGCGGAACCTTCCAGATTTCAAGAAGTCGGTGAAATTGAAGTACGTGAAGCTTGGTTATCATTACCTCATCACTCATGGCATGTACCTTTTTCTTTCCCCTCTGGTGGTGGTCATTGCTGCACAGCTATCAACCTTCTCCCTCAAAGATCTCCGTGACATTTGGGAGAATCTACAATACAATTTGATATCCGTCATTCTTTGCTCCACCATGATTGTATTTTTGTCCACACTATATATTATGACTCGTCCAAGACCCGTGTACCTTGTGAATTTCTCATGTTACAAGCCCGAGGAAGCCCGCAAATGCTCAAAGAAGATATTCATGGACCAGTCGAGGAGGAGTGGGTTTTTCACAGAGGAAAATCTTGAATTCCAGCGGAAGATTCTGGAGAGGGCTGGCCTTGGGGAAAGCACTTACTTTCCAGAAGCTGTTCTCAATGATCCTCCCAACCCTTCAATGCAAGAAGCAAGAAAAGAGGCTGAGCTTGTTATGTTTGGTGCAATTGATGAGCTGTTTTCCAAGACTTTTGTGAAGCCTAAGGACATTGGACTTCTGATTGTGAATTGCAGCCTCTTCTGCCCCACACCCTCACTTTCGGCAATGATTATCAATCATTATAAGCTAAGAGGGAACATAAAGAGCCTCAACCTTGGTGGAATGGGATGCAGTGCAGGTCTCATTTCAATTGATCTCGCCAAGGACCTTCTTCAAGTTCACCCCAATTCCTATGCATTGGTTGTTAGCACAGAAAACATCACTTTGAATTGGTACCCTGGGAATGACCGATCCAAGCTTGTTTCCAATTGTTTGTTCCGTATGGGAGGGGCTGCCATTCTGCTTTCCAACAAAAGCTCTGATAAAAGAAGATCCAAATACCGGCTGGTTGACACAGTTCGCACTAACAAGGCTTCTGATGACAAGTGCTTCGGCTGCGTTATCCAAGAGGAAGATTCCAATGGCAAGATTGGTGTCACTTTGTCAAAAGATTTGATGGCAGTTGCTGGTGATGCTTTGAAAACAAACATCACCACATTGGGACCTCTTGTCCTTCCAATGTCTGAACAACTCCTATTCTTTGCCACATTGGTTGGGAAGAAGCTTTTCAAGATGAAGATCAAGCCTTATATCCCAGACTTCAAGTTGGCTTTTGAGCATTTTTGCATCCATGCCGGAGGCAGGGCTGTGTTAGATGAACTTGAGAAGAACTTGCAGCTGTCCACTTGGCATATGGAGCCATCAAGGATGACACTTTACCGTTTTGGAAACACCTCCAGCAGTTCTCTTTGGTATGAATTGTCTTACGCAGAAGCCAAAGGGAGGATCAGGAAGGGTGATAGAACATGGCAGATAGCATTCGGCTCTGGATTCAAGTGCAACAGTGCAGTGTGGAAGGCTCTCAGGACCATCAACCCTGCCAAAGAGAGGAACCCTTGGATGGATGAGATCCACAATTTCCCAGTTGAAGTTCCAAGGATTTCATCCTTCTGA 1533 0.4508 MEETKADTPLMPPSSRNLPDFKKSVKLKYVKLGYHYLITHGMYLFLSPLVVVIAAQLSTFSLKDLRDIWENLQYNLISVILCSTMIVFLSTLYIMTRPRPVYLVNFSCYKPEEARKCSKKIFMDQSRRSGFFTEENLEFQRKILERAGLGESTYFPEAVLNDPPNPSMQEARKEAELVMFGAIDELFSKTFVKPKDIGLLIVNCSLFCPTPSLSAMIINHYKLRGNIKSLNLGGMGCSAGLISIDLAKDLLQVHPNSYALVVSTENITLNWYPGNDRSKLVSNCLFRMGGAAILLSNKSSDKRRSKYRLVDTVRTNKASDDKCFGCVIQEEDSNGKIGVTLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLQLSTWHMEPSRMTLYRFGNTSSSSLWYELSYAEAKGRIRKGDRTWQIAFGSGFKCNSAVWKALRTINPAKERNPWMDEIHNFPVEVPRISSF* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2054 510 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 399 479 IPR013747 -
Pvu9g2054 510 PANTHER 3-KETOACYL-COA SYNTHASE 3 509 IPR012392 GO:0006633|GO:0016020|GO:0016747
Pvu9g2054 510 CDD CHS_like 86 478 - -
Pvu9g2054 510 SUPERFAMILY Thiolase-like 286 482 IPR016039 GO:0016746
Pvu9g2054 510 SUPERFAMILY Thiolase-like 85 305 IPR016039 GO:0016746
Pvu9g2054 510 PANTHER 3-KETOACYL-COA SYNTHASE 11 3 509 - -
Pvu9g2054 510 Pfam FAE1/Type III polyketide synthase-like protein 93 382 IPR013601 GO:0006633|GO:0016020|GO:0016747
Pvu9g2054 510 Gene3D - 107 480 IPR016039 GO:0016746
Pvu9g2054 510 PIRSF Very_long_ch_3-ktacl-CoA_syn 20 510 IPR012392 GO:0006633|GO:0016020|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2054 Pvu-Chr9 29423036 29425912 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2054 3 509 Miscellaneous Gene Families AT2G26640 81.854 0.0 889
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2054 9 29423036 29425912 Pvu9g2054 9 29423036 29425912 ECH
Pvu3g1663 3 36764866 36767473 Pvu9g2054 9 29423036 29425912 PCT